Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   JNUCC24_RS08670 Genome accession   NZ_CP076532
Coordinates   1750293..1750673 (+) Length   126 a.a.
NCBI ID   WP_247721897.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-24     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1745293..1755673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC24_RS08660 (JNUCC24_08660) - 1747007..1747915 (+) 909 WP_216100391.1 serine protease -
  JNUCC24_RS08665 (JNUCC24_08665) - 1748062..1750068 (+) 2007 WP_216100393.1 glycosyltransferase family 39 protein -
  JNUCC24_RS08670 (JNUCC24_08670) nucA/comI 1750293..1750673 (+) 381 WP_247721897.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  JNUCC24_RS08675 (JNUCC24_08675) - 1750818..1751666 (+) 849 WP_044335939.1 STAS domain-containing protein -
  JNUCC24_RS08680 (JNUCC24_08680) - 1751699..1752241 (-) 543 WP_185854432.1 IseA DL-endopeptidase inhibitor family protein -
  JNUCC24_RS08685 (JNUCC24_08685) - 1752536..1752979 (+) 444 WP_044335372.1 hypothetical protein -
  JNUCC24_RS08690 (JNUCC24_08690) lexA 1753024..1753644 (-) 621 WP_024427080.1 transcriptional repressor LexA -
  JNUCC24_RS08695 (JNUCC24_08695) yneA 1753803..1754114 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  JNUCC24_RS08700 (JNUCC24_08700) - 1754132..1754779 (+) 648 WP_025093247.1 recombinase family protein -
  JNUCC24_RS08705 (JNUCC24_08705) - 1754849..1755079 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13712.36 Da        Isoelectric Point: 8.5098

>NTDB_id=576234 JNUCC24_RS08670 WP_247721897.1 1750293..1750673(+) (nucA/comI) [Bacillus sp. JNUCC-24]
MGTLLGGFGEKQAANGANRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=576234 JNUCC24_RS08670 WP_247721897.1 1750293..1750673(+) (nucA/comI) [Bacillus sp. JNUCC-24]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAATGGGGCTAATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCAGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCATCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548