Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JNUCC24_RS06535 | Genome accession | NZ_CP076532 |
| Coordinates | 1321944..1324046 (-) | Length | 700 a.a. |
| NCBI ID | WP_133743886.1 | Uniprot ID | - |
| Organism | Bacillus sp. JNUCC-24 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1316944..1329046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNUCC24_RS06510 (JNUCC24_06510) | - | 1317361..1317603 (+) | 243 | WP_024424676.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| JNUCC24_RS06515 (JNUCC24_06515) | - | 1317650..1319155 (-) | 1506 | WP_024424677.1 | ATP-binding protein | - |
| JNUCC24_RS06520 (JNUCC24_06520) | - | 1319360..1319815 (+) | 456 | WP_024424678.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| JNUCC24_RS06525 (JNUCC24_06525) | motB | 1320008..1320778 (-) | 771 | WP_024424679.1 | flagellar motor protein MotB | - |
| JNUCC24_RS06530 (JNUCC24_06530) | motA | 1320771..1321565 (-) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| JNUCC24_RS06535 (JNUCC24_06535) | clpC | 1321944..1324046 (-) | 2103 | WP_133743886.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JNUCC24_RS06540 (JNUCC24_06540) | - | 1324291..1325334 (+) | 1044 | WP_073204958.1 | hypothetical protein | - |
| JNUCC24_RS06545 (JNUCC24_06545) | queC | 1325609..1326265 (+) | 657 | WP_024424683.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| JNUCC24_RS06550 (JNUCC24_06550) | queD | 1326266..1326706 (+) | 441 | WP_024424684.1 | 6-carboxytetrahydropterin synthase QueD | - |
| JNUCC24_RS06555 (JNUCC24_06555) | queE | 1326699..1327430 (+) | 732 | WP_034623358.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| JNUCC24_RS06560 (JNUCC24_06560) | queF | 1327446..1327943 (+) | 498 | WP_024426839.1 | preQ(1) synthase | - |
| JNUCC24_RS06565 (JNUCC24_06565) | - | 1328398..1328760 (-) | 363 | WP_034623357.1 | winged helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 78010.60 Da Isoelectric Point: 4.9961
>NTDB_id=576226 JNUCC24_RS06535 WP_133743886.1 1321944..1324046(-) (clpC) [Bacillus sp. JNUCC-24]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGTADKTVKVGFQSDQEEAFEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGTADKTVKVGFQSDQEEAFEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=576226 JNUCC24_RS06535 WP_133743886.1 1321944..1324046(-) (clpC) [Bacillus sp. JNUCC-24]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTCTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTCGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGCGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGGATACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGTGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCTTATCATGGCGTCACCTATTCAGATGAAGCAATCAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAACGGAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAGATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGCCCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGACGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCACCGCAGATAAAACAGTCAAAGTGGGCTTCCAATCTGATCAGGAAGAAGCGTTTGAGGAACAATCACTCATTGA
TTCACTGAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTTCATGTCACA
AATGAAGCAAAAGAAAAGATTGCAGAGCTTGGATATCATCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATTCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTCTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTCGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGCGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGGATACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGTGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCTTATCATGGCGTCACCTATTCAGATGAAGCAATCAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAACGGAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAGATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGCCCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGACGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCACCGCAGATAAAACAGTCAAAGTGGGCTTCCAATCTGATCAGGAAGAAGCGTTTGAGGAACAATCACTCATTGA
TTCACTGAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTTCATGTCACA
AATGAAGCAAAAGAAAAGATTGCAGAGCTTGGATATCATCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATTCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
57.182 |
100 |
0.603 |
| clpE | Streptococcus mutans UA159 |
56.604 |
100 |
0.6 |
| clpE | Streptococcus pneumoniae Rx1 |
55.801 |
100 |
0.577 |
| clpE | Streptococcus pneumoniae D39 |
55.801 |
100 |
0.577 |
| clpE | Streptococcus pneumoniae R6 |
55.801 |
100 |
0.577 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.801 |
100 |
0.577 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.881 |
95.714 |
0.516 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.086 |
93.143 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
92.429 |
0.429 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.213 |
92.429 |
0.427 |
| clpC | Streptococcus mutans UA159 |
44.172 |
93.143 |
0.411 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.904 |
89.714 |
0.403 |
| clpC | Streptococcus pneumoniae Rx1 |
45.104 |
89 |
0.401 |
| clpC | Streptococcus pneumoniae D39 |
45.104 |
89 |
0.401 |