Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JP49775_RS09665 Genome accession   NZ_AP017922
Coordinates   1931662..1932480 (-) Length   272 a.a.
NCBI ID   WP_029550136.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP02758     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1926662..1937480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JP49775_RS09640 (JP02758_1790) - 1927755..1928732 (+) 978 WP_029550134.1 metal-dependent hydrolase -
  JP49775_RS09650 (JP02758_1791) - 1928993..1929829 (-) 837 WP_029550135.1 membrane protein -
  JP49775_RS09655 (JP02758_1792) - 1929838..1931355 (-) 1518 WP_000535846.1 ABC transporter ATP-binding protein -
  JP49775_RS09660 (JP02758_1793) - 1931370..1931684 (-) 315 WP_000435806.1 YfhH family protein -
  JP49775_RS09665 (JP02758_1794) recX 1931662..1932480 (-) 819 WP_029550136.1 recombination regulator RecX Regulator
  JP49775_RS09670 (JP02758_1795) sgtB 1932741..1933550 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  JP49775_RS09675 (JP02758_1796) - 1933891..1934406 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  JP49775_RS09680 (JP02758_1797) - 1934536..1934697 (-) 162 WP_001005407.1 SE1561 family protein -
  JP49775_RS09685 (JP02758_1798) yfkAB 1934921..1936072 (+) 1152 WP_001089602.1 radical SAM/CxCxxxxC motif protein YfkAB -
  JP49775_RS09690 (JP02758_1799) - 1936332..1936862 (-) 531 WP_031898303.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32303.11 Da        Isoelectric Point: 5.6062

>NTDB_id=57620 JP49775_RS09665 WP_029550136.1 1931662..1932480(-) (recX) [Staphylococcus aureus strain JP02758]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTDKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEEVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=57620 JP49775_RS09665 WP_029550136.1 1931662..1932480(-) (recX) [Staphylococcus aureus strain JP02758]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGGTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATTGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGATAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAACAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGAGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989

Multiple sequence alignment