Detailed information NTG0576067

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KNV92_RS17445
• Genome accession: NZ_CP076514
• Coordinates: 3549328..3550473 (+)
• Length: 381 a.a.
• NCBI ID: WP_094247421.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain WB
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3544328..3555473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNV92_RS17425 (KNV92_17430)	-	3544802..3545518 (-)	717	WP_025853599.1	Crp/Fnr family transcriptional regulator	-
KNV92_RS17430 (KNV92_17435)	narK	3545616..3546806 (-)	1191	WP_025853600.1	nitrate transporter NarK	-
KNV92_RS17435 (KNV92_17440)	argS	3546941..3548611 (-)	1671	WP_094247422.1	arginine--tRNA ligase	-
KNV92_RS17440 (KNV92_17445)	-	3548608..3549036 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
KNV92_RS17445 (KNV92_17450)	rapF	3549328..3550473 (+)	1146	WP_094247421.1	Rap family tetratricopeptide repeat protein	Regulator
KNV92_RS17450 (KNV92_17455)	-	3550457..3550576 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
KNV92_RS17455 (KNV92_17460)	speB	3550699..3551136 (-)	438	Protein_3402	agmatinase	-
KNV92_RS17460 (KNV92_17465)	-	3551298..3552725 (-)	1428	WP_071543386.1	DUF885 family protein	-
KNV92_RS17465 (KNV92_17470)	-	3552726..3554066 (-)	1341	WP_094247420.1	MATE family efflux transporter	-
KNV92_RS17470 (KNV92_17475)	-	3554063..3555118 (-)	1056	WP_071543387.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=576067 KNV92_RS17445 WP_094247421.1 3549328..3550473(+) (rapF) [Bacillus velezensis strain WB]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSELLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=576067 KNV92_RS17445 WP_094247421.1 3549328..3550473(+) (rapF) [Bacillus velezensis strain WB]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGAGCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.816	100	0.698
rapC	Bacillus subtilis subsp. subtilis str. 168	53.684	99.738	0.535