Detailed information NTG0576063

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KNV92_RS16535
• Genome accession: NZ_CP076514
• Coordinates: 3367846..3369009 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain WB
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3362846..3374009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNV92_RS16505 (KNV92_16510)	-	3363111..3363530 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
KNV92_RS16510 (KNV92_16515)	comFC	3363604..3364293 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
KNV92_RS16515 (KNV92_16520)	-	3364299..3364583 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
KNV92_RS16520 (KNV92_16525)	comFA	3364641..3366026 (-)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
KNV92_RS16525 (KNV92_16530)	-	3366134..3366982 (-)	849	WP_003151387.1	DegV family protein	-
KNV92_RS16530 (KNV92_16535)	degU	3367080..3367769 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KNV92_RS16535 (KNV92_16540)	degS	3367846..3369009 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KNV92_RS16540 (KNV92_16545)	-	3369232..3369879 (+)	648	WP_060657503.1	YigZ family protein	-
KNV92_RS16545 (KNV92_16550)	-	3369884..3371059 (+)	1176	WP_071392366.1	LCP family protein	-
KNV92_RS16550 (KNV92_16555)	-	3371149..3372225 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
KNV92_RS16555 (KNV92_16560)	-	3372358..3373554 (-)	1197	WP_094247452.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=576063 KNV92_RS16535 WP_003151385.1 3367846..3369009(-) (degS) [Bacillus velezensis strain WB]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=576063 KNV92_RS16535 WP_003151385.1 3367846..3369009(-) (degS) [Bacillus velezensis strain WB]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948