Detailed information NTG0576004

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KNV92_RS01965
• Genome accession: NZ_CP076514
• Coordinates: 387466..388614 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain WB
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 382466..393614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNV92_RS01945 (KNV92_01945)	-	382863..383546 (-)	684	WP_025853762.1	ABC transporter ATP-binding protein	-
KNV92_RS01950 (KNV92_01950)	-	383561..384997 (-)	1437	WP_094247244.1	ABC transporter permease	-
KNV92_RS01955 (KNV92_01955)	-	385210..385893 (+)	684	WP_094247243.1	response regulator transcription factor	-
KNV92_RS01960 (KNV92_01960)	-	385880..387313 (+)	1434	WP_161941456.1	HAMP domain-containing sensor histidine kinase	-
KNV92_RS01965 (KNV92_01965)	rapC	387466..388614 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
KNV92_RS01970 (KNV92_01970)	phrC	388598..388717 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KNV92_RS01975 (KNV92_01975)	-	388867..388977 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
KNV92_RS01980 (KNV92_01980)	-	389057..390421 (-)	1365	WP_070081361.1	aspartate kinase	-
KNV92_RS01985 (KNV92_01985)	ceuB	390836..391789 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
KNV92_RS01990 (KNV92_01990)	-	391779..392726 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
KNV92_RS01995 (KNV92_01995)	-	392720..393478 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=576004 KNV92_RS01965 WP_003156336.1 387466..388614(+) (rapC) [Bacillus velezensis strain WB]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=576004 KNV92_RS01965 WP_003156336.1 387466..388614(+) (rapC) [Bacillus velezensis strain WB]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAAGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568