Detailed information NTG0575979

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: KPF79_RS06025
• Genome accession: NZ_CP076513
• Coordinates: 1140345..1141289 (+)
• Length: 314 a.a.
• NCBI ID: WP_052779190.1
• Uniprot ID: -
• Organism: Campylobacter coli strain R19.1157
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1135345..1146289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPF79_RS06000 (KPF79_06000)	-	1135356..1136555 (-)	1200	WP_060785329.1	glycosyltransferase family 8 protein	-
KPF79_RS06005 (KPF79_06005)	-	1136683..1137987 (+)	1305	WP_052783333.1	hypothetical protein	-
KPF79_RS06010 (KPF79_06010)	-	1137984..1139033 (+)	1050	WP_002804034.1	asparagine synthase C-terminal domain-containing protein	-
KPF79_RS06015 (KPF79_06015)	-	1139036..1139452 (+)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
KPF79_RS06020 (KPF79_06020)	-	1139471..1140286 (-)	816	WP_052779189.1	glycosyltransferase family 2 protein	-
KPF79_RS06025 (KPF79_06025)	waaF	1140345..1141289 (+)	945	WP_052779190.1	lipopolysaccharide heptosyltransferase II	Regulator
KPF79_RS06030 (KPF79_06030)	-	1141272..1142726 (-)	1455	WP_002791237.1	hypothetical protein	-
KPF79_RS06035 (KPF79_06035)	gmhA	1142738..1143298 (-)	561	WP_002796916.1	D-sedoheptulose 7-phosphate isomerase	-
KPF79_RS06040 (KPF79_06040)	rfaE1	1143295..1144680 (-)	1386	WP_060785330.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
KPF79_RS06045 (KPF79_06045)	rfaD	1144673..1145626 (-)	954	WP_002831601.1	ADP-glyceromanno-heptose 6-epimerase	-
KPF79_RS06050 (KPF79_06050)	-	1145623..1146186 (-)	564	WP_002787747.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36184.65 Da
• Isoelectric Point: 10.1355

>NTDB_id=575979 KPF79_RS06025 WP_052779190.1 1140345..1141289(+) (waaF) [Campylobacter coli strain R19.1157]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=575979 KPF79_RS06025 WP_052779190.1 1140345..1141289(+) (waaF) [Campylobacter coli strain R19.1157]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.248	99.045	0.924