Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KPF77_RS07095 Genome accession   NZ_CP076510
Coordinates   1391194..1392162 (+) Length   322 a.a.
NCBI ID   WP_002799191.1    Uniprot ID   A0A0Q2L7K2
Organism   Campylobacter coli strain R19.0802     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1386194..1397162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPF77_RS07070 (KPF77_07070) - 1387051..1387776 (-) 726 WP_002812238.1 phosphatidate cytidylyltransferase -
  KPF77_RS07075 (KPF77_07075) - 1387785..1388123 (-) 339 WP_002777761.1 hypothetical protein -
  KPF77_RS07080 (KPF77_07080) - 1388125..1389432 (-) 1308 WP_002823835.1 NFACT family protein -
  KPF77_RS07085 (KPF77_07085) - 1389494..1390069 (+) 576 WP_002810385.1 molybdenum cofactor guanylyltransferase -
  KPF77_RS07090 (KPF77_07090) - 1390168..1391061 (+) 894 WP_233347901.1 phospholipase A -
  KPF77_RS07095 (KPF77_07095) ceuB 1391194..1392162 (+) 969 WP_002799191.1 ABC transporter permease Machinery gene
  KPF77_RS07100 (KPF77_07100) - 1392155..1393089 (+) 935 Protein_1392 iron chelate uptake ABC transporter family permease subunit -
  KPF77_RS07105 (KPF77_07105) - 1393086..1393841 (+) 756 WP_002780521.1 ABC transporter ATP-binding protein -
  KPF77_RS07110 (KPF77_07110) - 1393856..1394845 (+) 990 WP_002777774.1 siderophore ABC transporter substrate-binding protein -
  KPF77_RS07115 (KPF77_07115) - 1395011..1395643 (+) 633 WP_002810397.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35551.38 Da        Isoelectric Point: 9.5069

>NTDB_id=575961 KPF77_RS07095 WP_002799191.1 1391194..1392162(+) (ceuB) [Campylobacter coli strain R19.0802]
MLFKHLFSLNILLILLVVFGIISLFIGVIRINLDDIFSLSTTQLEIILLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIINAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIAGMGEDLALNLGVSYNTILFLGLIIVSIITSVV
IVSIGVIPFLGLIIPNLVAIYRGDNLKKNLIYIALCGALFLLICDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKT
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=575961 KPF77_RS07095 WP_002799191.1 1391194..1392162(+) (ceuB) [Campylobacter coli strain R19.0802]
TTGCTTTTTAAACACTTGTTTAGTTTAAATATTCTTTTAATTTTACTTGTTGTTTTTGGAATAATAAGCTTATTTATAGG
GGTTATTCGTATCAATTTAGACGATATTTTTTCACTCAGCACTACCCAGCTCGAAATCATTTTACTTACAAGAATTCCAA
GGCTTATTGCAATTTTACTTACAGGTATGAGTCTTAGTATATGCGGACTCATCATGCAACAACTCACGCAAAATAAATTT
GTTTCTCCAACCACTGCAGGGACTATGGATTGTGCTAAATTTGGCATTTTGATTTCTTTAATATTTTTTACAGGAGCTTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTCTAAGAAAAATTA
AACTTAAAGATGTGATTTTTGTGCCTTTGATAGGATTAATGTTTGGTGGGATTATAAATGCTATAACCACTTTTTTTGCT
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAGGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTTTATATTTCTTTACCGCTTTTTATACTTGCTTATTTTCTAGCCCATAAAATCACTATAGCAGGTATGGGAGAAGATC
TTGCTTTAAATCTTGGAGTTTCTTATAATACAATCTTATTTTTAGGCTTAATAATAGTTTCTATTATCACTAGCGTAGTG
ATTGTAAGCATTGGAGTTATACCTTTTTTAGGTCTTATCATCCCTAATCTTGTTGCCATTTATCGCGGGGATAATCTTAA
GAAAAATCTTATCTATATAGCATTATGCGGGGCTTTGTTTTTACTTATTTGCGATATTATCTCAAGACTTGTGATTTTTC
CTTTTGAAATGCCTTTGAGTATAACCACAGGTGTTTTGGGCTCTTTAATTTTTATTTTTCTTTTACTCAAAAGGAAAACT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q2L7K2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

89.441

100

0.894