Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | KPF76_RS03585 | Genome accession | NZ_CP076509 |
| Coordinates | 714932..715237 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain R18.1828 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 709932..720237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPF76_RS03550 (KPF76_03550) | - | 710347..711108 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| KPF76_RS03555 (KPF76_03555) | - | 711105..711788 (+) | 684 | WP_150966194.1 | 3-methyladenine DNA glycosylase | - |
| KPF76_RS03560 (KPF76_03560) | thiD | 711788..712600 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| KPF76_RS03565 (KPF76_03565) | thiE | 712590..713222 (+) | 633 | WP_216145830.1 | thiamine phosphate synthase | - |
| KPF76_RS03570 (KPF76_03570) | - | 713200..713829 (+) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| KPF76_RS03575 (KPF76_03575) | - | 713822..714274 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| KPF76_RS03580 (KPF76_03580) | - | 714271..714939 (-) | 669 | WP_002790524.1 | hypothetical protein | - |
| KPF76_RS03585 (KPF76_03585) | ctsT | 714932..715237 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| KPF76_RS03590 (KPF76_03590) | proC | 715234..715971 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| KPF76_RS03595 (KPF76_03595) | fliW | 715971..716360 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| KPF76_RS03600 (KPF76_03600) | - | 716525..717172 (+) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| KPF76_RS03605 (KPF76_03605) | lon | 717188..719563 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| KPF76_RS03610 (KPF76_03610) | rpsR | 719619..719879 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=575936 KPF76_RS03585 WP_002777852.1 714932..715237(-) (ctsT) [Campylobacter coli strain R18.1828]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=575936 KPF76_RS03585 WP_002777852.1 714932..715237(-) (ctsT) [Campylobacter coli strain R18.1828]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |