Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | D650_RS01045 | Genome accession | NC_020833 |
| Coordinates | 205312..206460 (+) | Length | 382 a.a. |
| NCBI ID | WP_006248764.1 | Uniprot ID | A0A547ELA4 |
| Organism | Mannheimia haemolytica USDA-ARS-USMARC-183 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 200312..211460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D650_RS01020 (D650_1990) | matP | 200804..201250 (-) | 447 | WP_006248769.1 | macrodomain Ter protein MatP | - |
| D650_RS01025 (D650_2000) | - | 201343..202980 (+) | 1638 | WP_006248768.1 | AAA family ATPase | - |
| D650_RS01030 (D650_2010) | fabA | 203093..203623 (+) | 531 | WP_006248767.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| D650_RS01035 (D650_2020) | rfaD | 203691..204617 (-) | 927 | WP_006248766.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| D650_RS01040 (D650_2030) | def | 204711..205223 (-) | 513 | WP_006248765.1 | peptide deformylase | - |
| D650_RS01045 (D650_2040) | dprA | 205312..206460 (+) | 1149 | WP_006248764.1 | DNA-processing protein DprA | Machinery gene |
| D650_RS01050 (D650_27505) | - | 206555..207905 (-) | 1351 | Protein_195 | PTS ascorbate transporter subunit IIC | - |
| D650_RS01055 (D650_2070) | - | 207918..208187 (-) | 270 | WP_006248763.1 | PTS sugar transporter subunit IIB | - |
| D650_RS01060 (D650_2080) | - | 208418..209440 (+) | 1023 | WP_006248762.1 | LacI family DNA-binding transcriptional regulator | - |
| D650_RS01065 (D650_2090) | secE | 209553..209966 (+) | 414 | WP_006248761.1 | preprotein translocase subunit SecE | - |
| D650_RS01070 (D650_2100) | nusG | 209968..210531 (+) | 564 | WP_006248760.1 | transcription termination/antitermination protein NusG | - |
| D650_RS01075 (D650_2120) | rplK | 210764..211192 (+) | 429 | WP_006248758.1 | 50S ribosomal protein L11 | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 42497.83 Da Isoelectric Point: 5.2272
>NTDB_id=57563 D650_RS01045 WP_006248764.1 205312..206460(+) (dprA) [Mannheimia haemolytica USDA-ARS-USMARC-183]
MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQIGWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLF
DENYPFLLKQISTAPPLIYVKGNVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIISGLSLGTLVIEATLNSGSLITAR
YALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVEGVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKN
LPSLTACQQQIYQHISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY
MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQIGWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLF
DENYPFLLKQISTAPPLIYVKGNVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIISGLSLGTLVIEATLNSGSLITAR
YALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVEGVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKN
LPSLTACQQQIYQHISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY
Nucleotide
Download Length: 1149 bp
>NTDB_id=57563 D650_RS01045 WP_006248764.1 205312..206460(+) (dprA) [Mannheimia haemolytica USDA-ARS-USMARC-183]
ATGGCATATCACTACGATTTATTACGATTATTACAAGTGCCGCAAATGGGGGCTCAACGTATAGGGCGATTATTGGCGGA
ACTCAATTTTGCTGAATTTTGCCACTATGACAAACTTCAACTCAAACAAATAGGTTGGAATGAAAAGCAAATTCAACGTT
GGTTTAATCCTGATCAAAAGTGGATTGATCAGGCGATGACTTGGTCAGAATTGCCAAATCAGCAAATTGTGACACTCTTT
GATGAAAATTATCCGTTTCTCTTAAAACAAATTTCGACTGCGCCACCGTTAATTTATGTAAAGGGAAATGTGGAAAGCCT
TTCTCTGCCACAAATTGCGATTGTTGGCAGCCGAGACTATTCTCATTATGGTGAATATTGGGCTGGGCAATTTGCTGCCG
AATTAGCTCGCCATAATATTATCATTACCAGCGGTTTAGCCATTGGTATTGACGGTTTTGCCCATCAAAAAATCGTTATG
GAACAAGGCATAACGATTGCCGTGTTAGGGAGTGGATTAAATCAAGTCTATCCTGCTCGCCATAAAAAATTAGCCGAACA
AATTGTTGATTTAGGTGGTGCATTGGTGTCGGAGTTCTCGCCTAATCAGCCGCCGGTGGCAGAAAATTTTCCTCGTCGTA
ATCGAATTATTAGTGGCTTATCGCTCGGCACTTTAGTTATTGAAGCAACGCTTAATAGTGGTTCACTGATTACCGCTCGT
TATGCCCTTGAACAAGGTAGGGAAGTGTTTGCGTTACCGAATGCGGTACAAAACCCTTACGCACAAGGTTGCCACAAGCT
AATTAAAGAAGGGGCATTGCTCGTGGAAGGTGTGGAAGATATTTTAGAGGTGGTCGCCTCGCAATATCAACCTCAGCAAA
TCCCTTTGTTTGATGAGTCTAAGCCAACAGTAAGCACATCTTTACAAGCGGTCAAAAACAGCGAAAAATTCGCAAAAAAT
CTGCCAAGTCTGACCGCTTGCCAGCAGCAAATTTATCAGCATATCAGCTTAGAGCCGATGGCAATTGATGATTTAGCCAA
AGTTACGGAGTTGACGATTGAAATATTGCTGGTTGAATTACTGGGTCTGGAATTAGCCGGTGTGATTAAACAAGTGAGTG
GGGGGTATGTGATGGATAATGGGTATTGA
ATGGCATATCACTACGATTTATTACGATTATTACAAGTGCCGCAAATGGGGGCTCAACGTATAGGGCGATTATTGGCGGA
ACTCAATTTTGCTGAATTTTGCCACTATGACAAACTTCAACTCAAACAAATAGGTTGGAATGAAAAGCAAATTCAACGTT
GGTTTAATCCTGATCAAAAGTGGATTGATCAGGCGATGACTTGGTCAGAATTGCCAAATCAGCAAATTGTGACACTCTTT
GATGAAAATTATCCGTTTCTCTTAAAACAAATTTCGACTGCGCCACCGTTAATTTATGTAAAGGGAAATGTGGAAAGCCT
TTCTCTGCCACAAATTGCGATTGTTGGCAGCCGAGACTATTCTCATTATGGTGAATATTGGGCTGGGCAATTTGCTGCCG
AATTAGCTCGCCATAATATTATCATTACCAGCGGTTTAGCCATTGGTATTGACGGTTTTGCCCATCAAAAAATCGTTATG
GAACAAGGCATAACGATTGCCGTGTTAGGGAGTGGATTAAATCAAGTCTATCCTGCTCGCCATAAAAAATTAGCCGAACA
AATTGTTGATTTAGGTGGTGCATTGGTGTCGGAGTTCTCGCCTAATCAGCCGCCGGTGGCAGAAAATTTTCCTCGTCGTA
ATCGAATTATTAGTGGCTTATCGCTCGGCACTTTAGTTATTGAAGCAACGCTTAATAGTGGTTCACTGATTACCGCTCGT
TATGCCCTTGAACAAGGTAGGGAAGTGTTTGCGTTACCGAATGCGGTACAAAACCCTTACGCACAAGGTTGCCACAAGCT
AATTAAAGAAGGGGCATTGCTCGTGGAAGGTGTGGAAGATATTTTAGAGGTGGTCGCCTCGCAATATCAACCTCAGCAAA
TCCCTTTGTTTGATGAGTCTAAGCCAACAGTAAGCACATCTTTACAAGCGGTCAAAAACAGCGAAAAATTCGCAAAAAAT
CTGCCAAGTCTGACCGCTTGCCAGCAGCAAATTTATCAGCATATCAGCTTAGAGCCGATGGCAATTGATGATTTAGCCAA
AGTTACGGAGTTGACGATTGAAATATTGCTGGTTGAATTACTGGGTCTGGAATTAGCCGGTGTGATTAAACAAGTGAGTG
GGGGGTATGTGATGGATAATGGGTATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
73.615 |
99.215 |
0.73 |
| dprA | Haemophilus influenzae Rd KW20 |
51.304 |
90.314 |
0.463 |
| dprA | Vibrio campbellii strain DS40M4 |
44.744 |
97.12 |
0.435 |
| dprA | Vibrio cholerae strain A1552 |
42.588 |
97.12 |
0.414 |
| dprA | Legionella pneumophila strain ERS1305867 |
40.29 |
90.314 |
0.364 |