Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   I653_RS21335 Genome accession   NC_020832
Coordinates   381963..382103 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 376963..387103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS21330 srfAB 378896..381871 (+) 2976 Protein_344 surfactin non-ribosomal peptide synthetase SrfAB -
  I653_RS21335 comS 381963..382103 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=57559 I653_RS21335 WP_010886404.1 381963..382103(+) (comS) [Bacillus subtilis subsp. subtilis str. BAB-1]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=57559 I653_RS21335 WP_010886404.1 381963..382103(+) (comS) [Bacillus subtilis subsp. subtilis str. BAB-1]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment