Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JP49775_RS03180 Genome accession   NZ_AP017922
Coordinates   669820..670494 (+) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP02758     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 664820..675494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JP49775_RS03155 (JP02758_0592) - 665035..666102 (+) 1068 WP_000980142.1 membrane protein -
  JP49775_RS03160 (JP02758_0593) - 666253..667296 (+) 1044 WP_149036310.1 alpha/beta hydrolase -
  JP49775_RS03165 (JP02758_0594) - 667626..668054 (+) 429 WP_029550278.1 hypothetical protein -
  JP49775_RS03170 (JP02758_0595) - 668262..668768 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  JP49775_RS03175 (JP02758_0596) graX 668881..669804 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  JP49775_RS03180 (JP02758_0597) braR 669820..670494 (+) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  JP49775_RS03185 (JP02758_0598) graS 670487..671527 (+) 1041 WP_029550279.1 histidine kinase GraS/ApsS -
  JP49775_RS03190 (JP02758_0599) vraF 671674..672435 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  JP49775_RS03195 (JP02758_0600) - 672425..674314 (+) 1890 WP_000009400.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=57559 JP49775_RS03180 WP_001166506.1 669820..670494(+) (braR) [Staphylococcus aureus strain JP02758]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=57559 JP49775_RS03180 WP_001166506.1 669820..670494(+) (braR) [Staphylococcus aureus strain JP02758]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411

Multiple sequence alignment