Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KMZ16_RS07710 Genome accession   NZ_CP076445
Coordinates   1469796..1470371 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ps4100     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464796..1475371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ16_RS07680 (KMZ16_07625) dapD 1464982..1465692 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KMZ16_RS07685 (KMZ16_07630) dapI 1465762..1466886 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KMZ16_RS07690 (KMZ16_07635) ykuS 1466948..1467193 (+) 246 WP_003232382.1 YkuS family protein -
  KMZ16_RS07695 (KMZ16_07640) mscT 1467230..1468033 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KMZ16_RS07700 (KMZ16_07645) ahpA 1468270..1468812 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KMZ16_RS07705 (KMZ16_07650) ykuV 1468884..1469330 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KMZ16_RS07710 (KMZ16_07655) rok 1469796..1470371 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KMZ16_RS07715 (KMZ16_07660) cse15 1470412..1471377 (-) 966 WP_029727015.1 spore protein Cse15 -
  KMZ16_RS07720 (KMZ16_07665) mobA 1471514..1472113 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  KMZ16_RS07725 (KMZ16_07670) moeB 1472164..1473183 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KMZ16_RS07730 (KMZ16_07675) glp 1473201..1474493 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  KMZ16_RS07735 (KMZ16_07680) mobB 1474454..1474975 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=575334 KMZ16_RS07710 WP_003232378.1 1469796..1470371(+) (rok) [Bacillus subtilis subsp. subtilis strain ps4100]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=575334 KMZ16_RS07710 WP_003232378.1 1469796..1470371(+) (rok) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1