Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KMZ16_RS04585 Genome accession   NZ_CP076445
Coordinates   901554..902348 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ps4100     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896554..907348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ16_RS04555 (KMZ16_04520) sxzA 897393..898424 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  KMZ16_RS04560 (KMZ16_04525) yfhB 898539..899420 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  KMZ16_RS04565 (KMZ16_04530) yfhC 899508..900092 (+) 585 WP_003243940.1 nitroreductase -
  KMZ16_RS04570 (KMZ16_04535) yfhD 900131..900322 (-) 192 WP_003233561.1 YfhD family protein -
  KMZ16_RS04575 (KMZ16_04540) yfhE 900389..900499 (-) 111 WP_003223230.1 YfhE family protein -
  KMZ16_RS04580 (KMZ16_04545) yfhF 900554..901465 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  KMZ16_RS04585 (KMZ16_04550) recX 901554..902348 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  KMZ16_RS04590 (KMZ16_04555) yfhH 902350..902670 (+) 321 WP_029726843.1 YfhH family protein -
  KMZ16_RS04595 (KMZ16_04560) yfhI 902807..904000 (+) 1194 WP_080477804.1 MFS transporter -
  KMZ16_RS04600 (KMZ16_04565) sspK 904032..904184 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KMZ16_RS04605 (KMZ16_04570) yfhJ 904309..904578 (+) 270 WP_003243789.1 YfhJ family protein -
  KMZ16_RS04610 (KMZ16_04575) yfhK 904723..905241 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  KMZ16_RS04615 (KMZ16_04580) spdL 905326..905658 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  KMZ16_RS04620 (KMZ16_04585) ephM 905645..906505 (+) 861 WP_069703773.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=575316 KMZ16_RS04585 WP_029726844.1 901554..902348(+) (recX) [Bacillus subtilis subsp. subtilis strain ps4100]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=575316 KMZ16_RS04585 WP_029726844.1 901554..902348(+) (recX) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996