Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KMP11_RS00255 Genome accession   NZ_CP076443
Coordinates   57757..59577 (-) Length   606 a.a.
NCBI ID   WP_216279875.1    Uniprot ID   A0A975SAJ3
Organism   Gemella sp. zg-570     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 52757..64577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMP11_RS00235 (KMP11_00235) - 53307..54167 (+) 861 WP_216279871.1 ROK family protein -
  KMP11_RS00240 (KMP11_00240) - 54176..55123 (+) 948 WP_216279872.1 alpha/beta fold hydrolase -
  KMP11_RS00245 (KMP11_00245) - 55125..55946 (+) 822 WP_216279873.1 acetylxylan esterase -
  KMP11_RS00250 (KMP11_00250) rcrQ 55992..57770 (-) 1779 WP_216279874.1 ABC transporter ATP-binding protein Regulator
  KMP11_RS00255 (KMP11_00255) rcrP 57757..59577 (-) 1821 WP_216279875.1 ABC transporter ATP-binding protein Regulator
  KMP11_RS00260 (KMP11_00260) - 59570..60016 (-) 447 WP_216279876.1 MarR family winged helix-turn-helix transcriptional regulator -
  KMP11_RS00265 (KMP11_00265) - 60148..61410 (-) 1263 WP_216279877.1 restriction endonuclease subunit S -
  KMP11_RS00270 (KMP11_00270) - 61654..61959 (-) 306 WP_215755886.1 hypothetical protein -
  KMP11_RS00275 (KMP11_00275) - 61959..62648 (-) 690 WP_216279878.1 N-acetylmannosamine-6-phosphate 2-epimerase -
  KMP11_RS00280 (KMP11_00280) - 62652..63482 (-) 831 WP_216279879.1 carbohydrate ABC transporter permease -
  KMP11_RS00285 (KMP11_00285) - 63494..64402 (-) 909 WP_216279880.1 carbohydrate ABC transporter permease -

Sequence

Protein


Download         Length: 606 a.a.        Molecular weight: 67674.81 Da        Isoelectric Point: 9.5123

>NTDB_id=575271 KMP11_RS00255 WP_216279875.1 57757..59577(-) (rcrP) [Gemella sp. zg-570]
MFKLLKKLTKTELLFVLISVAFVCANVWLELEIPAFMSEITTLLGTPGTSANDIFSFSIHSPGMKMLYYSLLSFIASVVV
GFFSARVAASFTSRIRSEIFHNILDYSETEIKKFGIPSLLTRSTNDITQIQILITIGLQVVTKGPIMAIWAMTKIAGKGV
VEWMWATAVAVAFLVFVIAILLTLVFPKQRIIQKMTDNLNLITRESLTGIRVVRAYNAEGYQEEKFQKTNDDVTRLNLFV
TRILSVMNPVMLSISSGLTLAIYWIGAFLINDIKIPQDPSKIEPALREKLAIFSDMIVFSSYAMLVVIGFMLMLVVFMIL
PRAIVSAKRINEVLETTSSIKFNKNTQKHSQEKATVEFSNVSFRYSENSEAVLENVSFKAEKGQTVAFIGSTGSGKSTLI
NLVPRFYDATSGQIKINGSDIKNYSKEDLHNIIGYIPQKAVLFSGSVKSNIQMGTSKQENLSDEAIWTALELAQSKNFVE
AKEDGLNAHVAQGGTNFSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDKILREQLKEKTKDTTKLIVAQRISTIID
ADLIIVLEEGRVVGRGTHEELLKTNKVYQEIAYSQLSKEELEHEKK

Nucleotide


Download         Length: 1821 bp        

>NTDB_id=575271 KMP11_RS00255 WP_216279875.1 57757..59577(-) (rcrP) [Gemella sp. zg-570]
ATGTTTAAATTATTAAAAAAATTGACAAAAACAGAACTACTATTTGTTCTAATATCGGTAGCTTTTGTTTGTGCTAATGT
TTGGCTAGAATTGGAAATACCAGCATTTATGTCAGAGATAACAACCCTACTGGGTACTCCTGGCACAAGTGCAAATGATA
TTTTTTCATTTAGTATTCACAGTCCAGGAATGAAAATGCTCTACTATTCTTTATTAAGTTTTATAGCTTCTGTTGTAGTA
GGTTTTTTCTCAGCAAGAGTTGCCGCTTCATTTACAAGCAGAATACGTTCAGAGATATTTCATAATATACTAGACTATTC
AGAAACAGAAATTAAAAAATTCGGTATTCCTAGTTTATTAACAAGGTCTACAAATGATATTACTCAAATTCAAATTTTAA
TAACAATAGGCTTACAGGTTGTAACAAAAGGTCCTATCATGGCTATTTGGGCTATGACTAAAATAGCTGGCAAGGGTGTT
GTTGAATGGATGTGGGCAACAGCCGTTGCAGTTGCTTTTCTAGTTTTTGTTATTGCCATATTACTAACTTTAGTCTTTCC
TAAGCAAAGAATTATTCAAAAGATGACAGACAACTTAAACTTAATCACTAGAGAATCATTAACTGGTATCCGTGTTGTTC
GTGCCTATAATGCCGAAGGTTATCAAGAAGAAAAATTCCAAAAAACTAATGATGATGTTACAAGACTAAACTTATTTGTT
ACTAGAATTTTATCTGTTATGAACCCCGTAATGTTATCAATATCTAGTGGTTTGACTTTAGCTATATATTGGATTGGTGC
TTTCTTAATAAATGATATTAAGATACCCCAAGACCCTAGCAAGATAGAACCTGCCCTGCGTGAAAAACTAGCAATATTTT
CTGATATGATAGTATTCTCATCTTATGCAATGTTGGTAGTAATAGGTTTTATGCTTATGCTGGTAGTCTTTATGATTTTA
CCAAGAGCCATAGTTTCTGCCAAAAGAATTAATGAAGTTTTGGAAACTACAAGTTCTATTAAATTTAACAAAAATACACA
AAAACATTCTCAAGAAAAAGCCACTGTAGAATTTAGTAATGTTAGCTTCAGATATTCTGAAAATTCAGAAGCTGTCCTTG
AAAATGTATCTTTTAAAGCCGAAAAAGGTCAAACTGTTGCCTTTATAGGTTCTACTGGTTCGGGTAAATCAACCTTGATT
AATCTTGTTCCAAGATTTTATGACGCAACGAGTGGTCAAATAAAAATTAATGGCAGTGATATTAAAAATTATTCAAAAGA
AGATTTACACAACATAATAGGATACATACCACAAAAAGCAGTCCTATTTAGTGGTAGTGTAAAATCCAATATACAAATGG
GAACTAGTAAGCAAGAAAATCTAAGTGATGAGGCTATTTGGACAGCCCTTGAATTAGCCCAGAGTAAAAACTTTGTTGAA
GCTAAAGAAGATGGTTTGAATGCCCACGTTGCTCAGGGTGGAACTAATTTTTCAGGCGGTCAACGTCAACGTTTAGCTAT
AGCTCGTGCCTTGGCAAGAAAACCGGAAATTTTAATTTTTGACGATTCATTCTCAGCACTTGACTATAAAACAGATAAAA
TTCTGCGTGAACAACTCAAAGAAAAAACAAAAGATACGACAAAATTAATAGTAGCACAAAGAATTTCTACTATTATTGAT
GCAGATTTAATTATCGTTTTAGAAGAAGGTAGGGTTGTTGGTCGTGGCACTCATGAGGAACTATTAAAAACTAACAAGGT
CTACCAAGAAATTGCCTACTCTCAATTATCTAAGGAGGAATTAGAACATGAAAAAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-272)

ABC transporter (ABC_tran)

(373-523)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

63.201

100

0.632