Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KMP11_RS00250 Genome accession   NZ_CP076443
Coordinates   55992..57770 (-) Length   592 a.a.
NCBI ID   WP_216279874.1    Uniprot ID   A0A975SAH7
Organism   Gemella sp. zg-570     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 50992..62770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMP11_RS00230 (KMP11_00230) - 52238..53116 (-) 879 WP_216279870.1 N-acetylneuraminate lyase -
  KMP11_RS00235 (KMP11_00235) - 53307..54167 (+) 861 WP_216279871.1 ROK family protein -
  KMP11_RS00240 (KMP11_00240) - 54176..55123 (+) 948 WP_216279872.1 alpha/beta fold hydrolase -
  KMP11_RS00245 (KMP11_00245) - 55125..55946 (+) 822 WP_216279873.1 acetylxylan esterase -
  KMP11_RS00250 (KMP11_00250) rcrQ 55992..57770 (-) 1779 WP_216279874.1 ABC transporter ATP-binding protein Regulator
  KMP11_RS00255 (KMP11_00255) rcrP 57757..59577 (-) 1821 WP_216279875.1 ABC transporter ATP-binding protein Regulator
  KMP11_RS00260 (KMP11_00260) - 59570..60016 (-) 447 WP_216279876.1 MarR family winged helix-turn-helix transcriptional regulator -
  KMP11_RS00265 (KMP11_00265) - 60148..61410 (-) 1263 WP_216279877.1 restriction endonuclease subunit S -
  KMP11_RS00270 (KMP11_00270) - 61654..61959 (-) 306 WP_215755886.1 hypothetical protein -
  KMP11_RS00275 (KMP11_00275) - 61959..62648 (-) 690 WP_216279878.1 N-acetylmannosamine-6-phosphate 2-epimerase -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65618.68 Da        Isoelectric Point: 7.6551

>NTDB_id=575270 KMP11_RS00250 WP_216279874.1 55992..57770(-) (rcrQ) [Gemella sp. zg-570]
MKKNNTSFFGKLKNHTQGFQLGFIVASILAIVSAVTTAIGPEKLKEITNLIVEGIKINSDGTFSNIDIDKVVNIAIFLTI
LYSISALAGYAQSFIIATIVQKFSNRLRKLISKKINSLPLKYFDSHSQGDTLSRVTNDVDTASQSLNQSLSPIISSTILI
LGAVFMMIKTNFTMAMTAIGSVFIGFALSVIIMISSQKIFKKQQTNLALVNGYIEEIYSGHNVVTSYNAINQSSSEFNKL
NSKLHKTMWKSQFISGIMMPMMIFIGNFGYVMVCVVGAILVIDGKITIGHIVAFMTYVRIFSQPLSQLAQAGTQMQSASA
AMGRIFEFLEEKDMQDDSDKKRQLDHIKGNVEFKNVSFGYSEEKTIIHNFTAKANAGQKIAIVGPTGAGKTTIVNLLMKF
YEINKGSIEIDGVDIKNMSRAEIHDAFSMVLQDTWLFEGSVRDNLVYNQKNISDEDVKKATKAVGVHHYIKTLPNGYDTI
LNDTNSLSVGQRQLITIARALLKNSPLLILDEATSSVDTRTEQIIQNAMDTLMKGRTSFVIAHRLSTIKNADLILVMREG
NIIEQGNHDELIEQNGFYAELYNSQFEEGEEE

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=575270 KMP11_RS00250 WP_216279874.1 55992..57770(-) (rcrQ) [Gemella sp. zg-570]
ATGAAAAAAAATAATACTTCTTTCTTTGGAAAATTAAAAAACCATACACAAGGCTTCCAATTAGGATTTATTGTCGCTAG
TATTTTAGCTATTGTTTCTGCCGTTACGACAGCAATTGGTCCCGAAAAATTAAAAGAAATTACCAATCTTATAGTAGAGG
GAATAAAAATTAACAGCGACGGAACTTTTTCTAATATTGATATAGACAAAGTTGTAAATATAGCCATATTTTTAACAATT
CTCTATTCAATATCGGCACTTGCAGGCTACGCTCAAAGTTTTATAATTGCAACCATTGTTCAGAAATTTAGTAATAGACT
GCGTAAACTTATCTCGAAAAAAATAAATAGTCTACCCCTAAAATACTTTGATTCTCATTCACAAGGAGATACCCTATCTC
GTGTTACCAATGATGTTGATACGGCTAGCCAGTCTTTAAATCAAAGTTTATCACCAATTATTTCATCAACAATACTAATT
TTGGGTGCAGTATTTATGATGATTAAAACTAATTTTACTATGGCTATGACTGCAATCGGTTCTGTTTTTATCGGTTTTGC
CTTGTCTGTAATAATTATGATTTCATCGCAAAAAATCTTTAAAAAACAGCAAACTAACCTTGCCCTAGTAAATGGTTATA
TAGAGGAAATTTATTCTGGTCATAATGTTGTAACTAGCTACAACGCTATAAATCAAAGTAGCAGTGAATTTAATAAACTA
AATAGCAAACTCCATAAAACTATGTGGAAATCTCAATTTATATCTGGTATCATGATGCCCATGATGATATTTATAGGCAA
CTTCGGTTATGTTATGGTCTGTGTCGTGGGTGCAATCTTGGTTATTGACGGCAAGATTACAATAGGCCATATCGTAGCCT
TTATGACCTATGTGCGTATTTTTTCACAACCCCTATCACAACTTGCCCAAGCTGGAACACAAATGCAATCTGCCAGTGCA
GCCATGGGTCGTATTTTTGAATTTTTAGAAGAAAAAGATATGCAAGATGACAGCGACAAAAAACGTCAATTAGACCATAT
CAAAGGAAATGTAGAATTTAAAAATGTTTCATTCGGTTATAGCGAGGAAAAAACAATAATTCATAATTTCACAGCAAAAG
CAAATGCCGGGCAAAAAATCGCCATAGTAGGTCCAACTGGAGCTGGTAAAACTACCATAGTAAACCTATTAATGAAATTC
TATGAAATTAATAAGGGGTCAATAGAAATAGATGGTGTCGATATTAAAAATATGAGCAGGGCTGAAATCCACGACGCTTT
TTCTATGGTTCTTCAAGATACTTGGTTATTTGAAGGAAGTGTCCGTGATAACCTAGTTTATAACCAAAAAAATATTTCTG
ATGAAGATGTTAAAAAAGCTACAAAAGCAGTCGGCGTTCATCACTACATCAAAACTTTACCCAATGGTTATGATACTATC
CTAAACGATACTAATAGCCTTTCAGTAGGACAAAGACAGCTAATAACTATTGCTAGAGCCCTACTAAAAAATTCACCACT
TCTAATACTTGATGAAGCTACATCATCTGTGGATACTCGTACAGAACAAATAATTCAAAATGCCATGGATACATTGATGA
AAGGACGTACATCTTTCGTTATAGCCCACAGACTTTCAACCATTAAAAATGCAGACTTAATACTGGTTATGCGTGAGGGT
AATATTATCGAACAGGGTAACCACGATGAACTGATTGAACAAAATGGTTTCTATGCCGAACTTTATAACTCACAATTTGA
AGAGGGTGAAGAAGAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-305)

ABC transporter (ABC_tran)

(368-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

64.456

99.324

0.64