Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   ZHX2020_RS18965 Genome accession   NZ_CP076409
Coordinates   3558574..3558852 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus sp. ZHX3     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 3553574..3563852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS18945 (ZHX2020_18810) - 3554762..3555673 (+) 912 WP_014479685.1 ketopantoate reductase family protein -
  ZHX2020_RS18950 (ZHX2020_18815) - 3555707..3556939 (-) 1233 WP_003232341.1 aminopeptidase -
  ZHX2020_RS18955 (ZHX2020_18820) - 3557048..3557182 (-) 135 WP_003238865.1 protein YkpC -
  ZHX2020_RS18960 (ZHX2020_18825) mreBH 3557283..3558290 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  ZHX2020_RS18965 (ZHX2020_18830) abrB 3558574..3558852 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  ZHX2020_RS18970 (ZHX2020_18835) kinC 3559042..3560325 (+) 1284 WP_014479686.1 two-component sensor histidine kinase KinC -
  ZHX2020_RS18975 (ZHX2020_18840) - 3560341..3561174 (+) 834 WP_014479687.1 gamma-glutamylcyclotransferase -
  ZHX2020_RS18980 (ZHX2020_18845) ktrC 3561237..3561902 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  ZHX2020_RS18985 (ZHX2020_18850) ade 3562057..3563790 (+) 1734 WP_014479688.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=575170 ZHX2020_RS18965 WP_003244728.1 3558574..3558852(+) (abrB) [Bacillus sp. ZHX3]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=575170 ZHX2020_RS18965 WP_003244728.1 3558574..3558852(+) (abrB) [Bacillus sp. ZHX3]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576