Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ZHX2020_RS18840 Genome accession   NZ_CP076409
Coordinates   3533207..3533782 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. ZHX3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3528207..3538782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS18810 (ZHX2020_18675) dapD 3528395..3529105 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ZHX2020_RS18815 (ZHX2020_18680) - 3529175..3530299 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  ZHX2020_RS18820 (ZHX2020_18685) - 3530361..3530606 (+) 246 WP_003232382.1 YkuS family protein -
  ZHX2020_RS18825 (ZHX2020_18690) mscT 3530643..3531446 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ZHX2020_RS18830 (ZHX2020_18695) ahpA 3531683..3532225 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ZHX2020_RS18835 (ZHX2020_18700) ykuV 3532295..3532741 (+) 447 WP_014479665.1 thiol-disulfide oxidoreductase YkuV -
  ZHX2020_RS18840 (ZHX2020_18705) rok 3533207..3533782 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ZHX2020_RS18850 (ZHX2020_18715) cse15 3535113..3536078 (-) 966 WP_014479669.1 spore protein Cse15 -
  ZHX2020_RS18855 (ZHX2020_18720) - 3536215..3536814 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ZHX2020_RS18860 (ZHX2020_18725) - 3536865..3537884 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=575169 ZHX2020_RS18840 WP_003232378.1 3533207..3533782(+) (rok) [Bacillus sp. ZHX3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=575169 ZHX2020_RS18840 WP_003232378.1 3533207..3533782(+) (rok) [Bacillus sp. ZHX3]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1