Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ZHX2020_RS17230 Genome accession   NZ_CP076409
Coordinates   3251716..3252867 (+) Length   383 a.a.
NCBI ID   WP_014479449.1    Uniprot ID   -
Organism   Bacillus sp. ZHX3     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3246716..3257867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS17195 (ZHX2020_17100) - 3247388..3248605 (+) 1218 WP_072592593.1 MFS transporter -
  ZHX2020_RS17200 (ZHX2020_17105) - 3248769..3249347 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ZHX2020_RS17205 (ZHX2020_17110) spx 3249528..3249923 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ZHX2020_RS17210 (ZHX2020_17115) - 3249966..3250622 (-) 657 WP_014479447.1 TerC family protein -
  ZHX2020_RS17215 (ZHX2020_17120) - 3250792..3250932 (+) 141 WP_119122854.1 hypothetical protein -
  ZHX2020_RS17220 (ZHX2020_17125) mecA 3250899..3251555 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  ZHX2020_RS17225 (ZHX2020_17130) - 3251550..3251672 (-) 123 WP_003245684.1 hypothetical protein -
  ZHX2020_RS17230 (ZHX2020_17135) coiA 3251716..3252867 (+) 1152 WP_014479449.1 competence protein CoiA Machinery gene
  ZHX2020_RS17235 (ZHX2020_17140) pepF 3253097..3254926 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  ZHX2020_RS17240 (ZHX2020_17145) - 3254964..3255131 (-) 168 WP_003244944.1 hypothetical protein -
  ZHX2020_RS17245 (ZHX2020_17150) spxH 3255446..3256345 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ZHX2020_RS17250 (ZHX2020_17155) - 3256342..3256740 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ZHX2020_RS17255 (ZHX2020_17160) cwlQ 3256995..3257729 (-) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44861.98 Da        Isoelectric Point: 9.9417

>NTDB_id=575164 ZHX2020_RS17230 WP_014479449.1 3251716..3252867(+) (coiA) [Bacillus sp. ZHX3]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=575164 ZHX2020_RS17230 WP_014479449.1 3251716..3252867(+) (coiA) [Bacillus sp. ZHX3]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

97.389

0.958