Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ZHX2020_RS05165 Genome accession   NZ_CP076409
Coordinates   940535..941179 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. ZHX3     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 935535..946179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS05130 (ZHX2020_05095) - 936727..937158 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ZHX2020_RS05135 (ZHX2020_05100) - 937158..937499 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  ZHX2020_RS05140 (ZHX2020_05105) - 937492..938973 (+) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  ZHX2020_RS05145 (ZHX2020_05110) - 938979..939455 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ZHX2020_RS05150 (ZHX2020_05115) - 939455..939739 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ZHX2020_RS05155 (ZHX2020_05120) mnhG 939723..940097 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ZHX2020_RS05160 (ZHX2020_05125) - 940136..940516 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ZHX2020_RS05165 (ZHX2020_05130) comA 940535..941179 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ZHX2020_RS05170 (ZHX2020_05135) comP 941260..943572 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  ZHX2020_RS05175 (ZHX2020_05140) comX 943588..943809 (-) 222 WP_014480704.1 competence pheromone ComX -
  ZHX2020_RS05180 (ZHX2020_05145) - 943811..944674 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  ZHX2020_RS05185 (ZHX2020_05150) degQ 944859..944999 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ZHX2020_RS05190 (ZHX2020_05155) - 945221..945346 (+) 126 WP_003228793.1 hypothetical protein -
  ZHX2020_RS05195 (ZHX2020_05160) - 945460..945828 (+) 369 WP_014477834.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=575121 ZHX2020_RS05165 WP_003220716.1 940535..941179(-) (comA) [Bacillus sp. ZHX3]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=575121 ZHX2020_RS05165 WP_003220716.1 940535..941179(-) (comA) [Bacillus sp. ZHX3]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAATGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATAGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1