Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   I653_RS07400 Genome accession   NC_020832
Coordinates   1452442..1453017 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447442..1458017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS07370 (I653_07280) dapD 1447630..1448340 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  I653_RS07375 (I653_07285) dapI 1448410..1449534 (+) 1125 WP_015383541.1 N-acetyldiaminopimelate deacetylase -
  I653_RS07380 (I653_07290) ykuS 1449596..1449841 (+) 246 WP_003232382.1 YkuS family protein -
  I653_RS07385 (I653_07295) mscT 1449878..1450681 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  I653_RS07390 (I653_07300) ahpA 1450918..1451460 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  I653_RS07395 (I653_07305) ykuV 1451530..1451976 (+) 447 WP_015483177.1 thiol-disulfide oxidoreductase YkuV -
  I653_RS07400 (I653_07310) rok 1452442..1453017 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  I653_RS07405 (I653_07315) cse15 1453058..1454023 (-) 966 WP_015383544.1 spore protein Cse15 -
  I653_RS07410 (I653_07320) mobA 1454160..1454759 (+) 600 WP_015383545.1 molybdenum cofactor guanylyltransferase -
  I653_RS07415 (I653_07325) moeB 1454810..1455829 (+) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  I653_RS07420 (I653_07330) glp 1455847..1457139 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  I653_RS07425 (I653_07335) mobB 1457100..1457621 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=57512 I653_RS07400 WP_003232378.1 1452442..1453017(+) (rok) [Bacillus subtilis subsp. subtilis str. BAB-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=57512 I653_RS07400 WP_003232378.1 1452442..1453017(+) (rok) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment