Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   I653_RS07300 Genome accession   NC_020832
Coordinates   1436557..1437021 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1431557..1442021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS07285 (I653_07190) kinA 1432024..1433844 (+) 1821 WP_015483173.1 sporulation histidine kinase KinA -
  I653_RS07290 (I653_07195) dapX 1433854..1435035 (-) 1182 WP_015252196.1 aminotransferase A -
  I653_RS20340 (I653_07200) - 1435237..1435398 (-) 162 WP_003245246.1 hypothetical protein -
  I653_RS07295 (I653_07205) cheV 1435602..1436513 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  I653_RS07300 (I653_07210) kre 1436557..1437021 (-) 465 WP_003232406.1 YkyB family protein Regulator
  I653_RS07305 (I653_07215) ykuC 1437147..1438439 (-) 1293 WP_014479656.1 MFS transporter -
  I653_RS07310 (I653_07220) ltdD 1438515..1439009 (-) 495 WP_080030726.1 L,D-transpeptidase family protein -
  I653_RS07315 (I653_07225) ppeE 1439066..1439926 (-) 861 WP_015483175.1 metallophosphoesterase -
  I653_RS07320 (I653_07230) fadH 1440069..1440833 (+) 765 WP_015483176.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=57511 I653_RS07300 WP_003232406.1 1436557..1437021(-) (kre) [Bacillus subtilis subsp. subtilis str. BAB-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=57511 I653_RS07300 WP_003232406.1 1436557..1437021(-) (kre) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment