Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   JNUCC22_RS19440 Genome accession   NZ_CP076408
Coordinates   348653..348817 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-22     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 343653..353817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS19435 srfAB 345544..348636 (+) 3093 Protein_317 surfactin non-ribosomal peptide synthetase SrfAB -
  JNUCC22_RS19440 comS 348653..348817 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=575095 JNUCC22_RS19440 WP_012116773.1 348653..348817(+) (comS) [Bacillus sp. JNUCC-22]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=575095 JNUCC22_RS19440 WP_012116773.1 348653..348817(+) (comS) [Bacillus sp. JNUCC-22]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5