Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JNUCC22_RS07180 Genome accession   NZ_CP076408
Coordinates   1378186..1378782 (+) Length   198 a.a.
NCBI ID   WP_082997942.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-22     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373186..1383782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS07150 (JNUCC22_07150) - 1373400..1373855 (+) 456 WP_038463794.1 flavodoxin -
  JNUCC22_RS07155 (JNUCC22_07155) dapD 1373937..1374647 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JNUCC22_RS07160 (JNUCC22_07160) - 1374718..1375842 (+) 1125 WP_216062232.1 N-acetyldiaminopimelate deacetylase -
  JNUCC22_RS07165 (JNUCC22_07165) - 1375903..1376148 (+) 246 WP_216062233.1 YkuS family protein -
  JNUCC22_RS07170 (JNUCC22_07170) - 1376182..1376988 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  JNUCC22_RS07175 (JNUCC22_07175) - 1377276..1377734 (+) 459 WP_007611110.1 TlpA disulfide reductase family protein -
  JNUCC22_RS07180 (JNUCC22_07180) rok 1378186..1378782 (+) 597 WP_082997942.1 transcriptional regulator Rok Regulator
  JNUCC22_RS07185 (JNUCC22_07185) - 1378806..1379798 (-) 993 WP_021493753.1 hypothetical protein -
  JNUCC22_RS07190 (JNUCC22_07190) - 1379944..1380546 (+) 603 WP_216062234.1 molybdenum cofactor guanylyltransferase -
  JNUCC22_RS07195 (JNUCC22_07195) - 1380597..1381616 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  JNUCC22_RS07200 (JNUCC22_07200) glp 1381634..1382926 (+) 1293 WP_007611114.1 gephyrin-like molybdotransferase Glp -
  JNUCC22_RS07205 (JNUCC22_07205) mobB 1382887..1383408 (+) 522 WP_032868152.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22541.57 Da        Isoelectric Point: 9.6909

>NTDB_id=575048 JNUCC22_RS07180 WP_082997942.1 1378186..1378782(+) (rok) [Bacillus sp. JNUCC-22]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETSETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=575048 JNUCC22_RS07180 WP_082997942.1 1378186..1378782(+) (rok) [Bacillus sp. JNUCC-22]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAACCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACATCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.567

97.98

0.838