Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JNUCC22_RS07080 Genome accession   NZ_CP076408
Coordinates   1362322..1362786 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus sp. JNUCC-22     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1357322..1367786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS07060 (JNUCC22_07060) - 1357803..1359623 (+) 1821 WP_023356869.1 PAS domain-containing protein -
  JNUCC22_RS07065 (JNUCC22_07065) - 1359648..1360817 (-) 1170 WP_167860099.1 aminotransferase A -
  JNUCC22_RS07070 (JNUCC22_07070) - 1361018..1361179 (-) 162 WP_007409608.1 hypothetical protein -
  JNUCC22_RS07075 (JNUCC22_07075) cheV 1361368..1362279 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  JNUCC22_RS07080 (JNUCC22_07080) kre 1362322..1362786 (-) 465 WP_003154622.1 YkyB family protein Regulator
  JNUCC22_RS07085 (JNUCC22_07085) - 1362909..1364201 (-) 1293 WP_015239757.1 MFS transporter -
  JNUCC22_RS07090 (JNUCC22_07090) - 1364277..1364771 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  JNUCC22_RS07095 (JNUCC22_07095) - 1364846..1365709 (-) 864 WP_038463786.1 metallophosphoesterase -
  JNUCC22_RS07100 (JNUCC22_07100) fadH 1365854..1366618 (+) 765 WP_038463789.1 2,4-dienoyl-CoA reductase -
  JNUCC22_RS19515 - 1366732..1367278 (+) 547 Protein_1356 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=575047 JNUCC22_RS07080 WP_003154622.1 1362322..1362786(-) (kre) [Bacillus sp. JNUCC-22]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=575047 JNUCC22_RS07080 WP_003154622.1 1362322..1362786(-) (kre) [Bacillus sp. JNUCC-22]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929