Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   JNUCC22_RS05800 Genome accession   NZ_CP076408
Coordinates   1130879..1132708 (+) Length   609 a.a.
NCBI ID   WP_216062320.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-22     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125879..1137708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS05770 (JNUCC22_05770) - 1126542..1127120 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  JNUCC22_RS05775 (JNUCC22_05775) spx 1127299..1127694 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  JNUCC22_RS05780 (JNUCC22_05780) - 1127752..1128408 (-) 657 WP_015417213.1 TerC family protein -
  JNUCC22_RS05790 (JNUCC22_05790) mecA 1128684..1129340 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  JNUCC22_RS05795 (JNUCC22_05795) - 1129491..1130651 (+) 1161 WP_150941120.1 competence protein CoiA family protein -
  JNUCC22_RS05800 (JNUCC22_05800) pepF 1130879..1132708 (+) 1830 WP_216062320.1 oligoendopeptidase F Regulator
  JNUCC22_RS05805 (JNUCC22_05805) - 1132746..1132913 (-) 168 WP_003155026.1 hypothetical protein -
  JNUCC22_RS05810 (JNUCC22_05810) spxH 1133199..1134101 (-) 903 WP_007409106.1 protease adaptor protein SpxH -
  JNUCC22_RS05815 (JNUCC22_05815) - 1134098..1134496 (-) 399 WP_053104216.1 thiol management oxidoreductase -
  JNUCC22_RS05820 (JNUCC22_05820) - 1134725..1135411 (-) 687 WP_216062203.1 lytic transglycosylase domain-containing protein -
  JNUCC22_RS05825 (JNUCC22_05825) - 1135416..1135988 (-) 573 WP_021494986.1 CYTH domain-containing protein -
  JNUCC22_RS05830 (JNUCC22_05830) - 1136113..1136478 (+) 366 WP_003155020.1 hypothetical protein -
  JNUCC22_RS05835 (JNUCC22_05835) yjbM 1136506..1137141 (+) 636 WP_007610625.1 GTP diphosphokinase -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 69826.54 Da        Isoelectric Point: 5.3524

>NTDB_id=575044 JNUCC22_RS05800 WP_216062320.1 1130879..1132708(+) (pepF) [Bacillus sp. JNUCC-22]
MTEENKAAQLPDRSKVKAEHTWRLEDIFPSDEAWNKEFQAVKELIPNLSSFKGTLAHSADNLYAALTAQDEVTNRLGKLY
AYAHMRSDQDTGNSFYQGLNDKAASLYSQAASATAYIEPEILAIQEDKLHQFILEKEELKLYSHAIEEITKQRPHVLSEQ
EEALLAEASEALSSPSNTFSVLNNADITFPSIKDENGKETQITHGNFINFLESSNREVRKNAFEAVYKTYGQYKNTMATT
LSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLIKTINKHLPLLHRYIDLRKKVLGLDEVHIYDLYTPLVKDSGM
KVTYEEAKEYMLKGLAPLGEEYASILKEGLENRWVDVYENKGKRSGAYSSGTYGTNPYILMNWHDNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYMLNSLKDEKQRLYLLNHMLEGFRGTVFRQTMFAEFEHLIHTKAQ
EGEPLTPELLNELYYDLNKKYFGDNMVIDKEISLEWSRIPHFYYNYYVYQYATGYSAAQALSSQILKEGKPAVERYTEFL
KAGSSEYPIDILKKAGVDMTSPEPIEAACKMFEEKLNEMEELLSKLNPS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=575044 JNUCC22_RS05800 WP_216062320.1 1130879..1132708(+) (pepF) [Bacillus sp. JNUCC-22]
ATGACTGAGGAAAATAAAGCAGCACAGCTGCCTGACAGAAGTAAAGTAAAGGCAGAGCATACATGGAGACTAGAGGATAT
TTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAAGCAGTTAAAGAATTAATCCCGAATTTATCTTCTTTTAAAGGCA
CGCTTGCTCATTCGGCTGATAATTTATACGCTGCGCTTACGGCACAGGATGAAGTGACGAACCGCCTTGGGAAACTTTAT
GCATACGCGCATATGCGCTCAGACCAGGATACGGGAAATTCTTTCTACCAAGGGCTGAACGATAAAGCCGCAAGCCTGTA
TTCTCAGGCTGCCAGCGCGACTGCTTACATTGAACCGGAAATTCTGGCGATTCAGGAGGACAAGCTGCACCAGTTTATTC
TGGAAAAAGAGGAGCTTAAGCTTTACTCCCATGCAATTGAAGAAATTACAAAACAGCGTCCGCACGTGCTGAGCGAACAA
GAAGAGGCCCTGCTTGCGGAAGCCTCTGAAGCGCTGTCGTCGCCTTCCAATACATTCAGCGTTTTAAATAACGCCGATAT
TACGTTTCCGTCGATTAAAGATGAAAACGGCAAGGAAACTCAAATCACACACGGCAACTTTATTAATTTCCTGGAAAGCA
GCAATCGTGAAGTCCGTAAAAACGCATTTGAAGCCGTATATAAAACATACGGACAGTATAAAAACACGATGGCGACTACA
CTCAGCGGCACTGTGAAAAAAGATAATTTTTACGCCCGTGTGAAAAAGTATAAATCAGCACGGGAAGCGGCTTTATCCAA
TAACAGCATCCCTGAAGAAGTTTACGATAACCTTATTAAAACGATCAATAAACATCTTCCGTTATTACACCGTTACATTG
ACCTGCGGAAAAAGGTTCTCGGCCTTGATGAAGTCCATATTTATGACCTTTACACACCGCTTGTAAAAGATTCGGGAATG
AAGGTCACATATGAGGAAGCGAAAGAGTATATGCTCAAAGGACTTGCTCCGCTGGGCGAGGAATACGCGTCTATTTTAAA
AGAAGGACTTGAAAACCGCTGGGTCGATGTATACGAAAATAAAGGAAAACGCAGCGGTGCTTATTCGTCCGGTACATACG
GCACGAATCCGTACATCTTGATGAACTGGCATGATAATGTCAATAATCTGTTTACGCTCGTTCACGAGTTCGGCCATTCC
GTGCACAGCTACTATACGAGAAAATATCAGCCGTATCCGTACGGTAACTACAGCATTTTTGTCGCTGAAGTCGCTTCAAC
GACTAATGAAGCGCTGCTCGGTGAATATATGCTGAACAGCTTAAAGGATGAAAAACAGCGTCTGTACCTGCTCAACCACA
TGCTTGAAGGATTCAGAGGCACAGTGTTCAGACAGACGATGTTCGCTGAATTTGAGCATCTGATTCATACGAAAGCACAG
GAAGGCGAGCCGCTAACGCCTGAACTGCTGAACGAACTTTATTATGATCTGAATAAAAAGTATTTCGGTGACAACATGGT
GATTGATAAAGAAATCAGTCTGGAATGGTCAAGAATTCCGCATTTCTATTACAATTATTATGTGTATCAATATGCGACAG
GCTACAGTGCGGCCCAAGCGCTGAGCAGCCAGATCTTAAAAGAAGGCAAGCCTGCGGTGGAGCGCTATACCGAATTCTTA
AAAGCGGGAAGCTCGGAATATCCGATCGACATACTGAAAAAAGCGGGAGTCGATATGACATCGCCTGAACCGATCGAGGC
GGCCTGCAAAATGTTTGAAGAGAAACTGAACGAGATGGAAGAGCTTCTTTCGAAATTGAACCCTTCGTAG

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50

97.537

0.488