Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   JNUCC22_RS05665 Genome accession   NZ_CP076408
Coordinates   1104103..1105056 (+) Length   317 a.a.
NCBI ID   WP_015417205.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-22     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099103..1110056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS05640 (JNUCC22_05640) argF 1100921..1101892 (+) 972 WP_007409130.1 ornithine carbamoyltransferase -
  JNUCC22_RS05645 (JNUCC22_05645) - 1101968..1102147 (+) 180 WP_003155070.1 YjzC family protein -
  JNUCC22_RS05650 (JNUCC22_05650) - 1102184..1102369 (-) 186 WP_007409129.1 YjzD family protein -
  JNUCC22_RS05655 (JNUCC22_05655) - 1102630..1103364 (+) 735 WP_007409127.1 hypothetical protein -
  JNUCC22_RS05660 (JNUCC22_05660) - 1103447..1104013 (+) 567 WP_216062200.1 hypothetical protein -
  JNUCC22_RS05665 (JNUCC22_05665) med 1104103..1105056 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  JNUCC22_RS05670 (JNUCC22_05670) comZ 1105069..1105260 (+) 192 WP_003155061.1 ComZ family protein Regulator
  JNUCC22_RS05675 (JNUCC22_05675) - 1105289..1105507 (-) 219 WP_007409123.1 hypothetical protein -
  JNUCC22_RS05680 (JNUCC22_05680) - 1105674..1106612 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  JNUCC22_RS05685 (JNUCC22_05685) fabF 1106635..1107873 (+) 1239 WP_020955629.1 beta-ketoacyl-ACP synthase II -
  JNUCC22_RS05690 (JNUCC22_05690) - 1107956..1108741 (+) 786 WP_020955630.1 DUF2268 domain-containing protein -
  JNUCC22_RS05695 (JNUCC22_05695) - 1108915..1109901 (+) 987 WP_007409119.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.96 Da        Isoelectric Point: 4.6686

>NTDB_id=575039 JNUCC22_RS05665 WP_015417205.1 1104103..1105056(+) (med) [Bacillus sp. JNUCC-22]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=575039 JNUCC22_RS05665 WP_015417205.1 1104103..1105056(+) (med) [Bacillus sp. JNUCC-22]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782