Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JNUCC22_RS04255 Genome accession   NZ_CP076408
Coordinates   843522..844313 (+) Length   263 a.a.
NCBI ID   WP_029325989.1    Uniprot ID   -
Organism   Bacillus sp. JNUCC-22     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 838522..849313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS04230 (JNUCC22_04230) - 840515..841399 (+) 885 WP_015239425.1 PhzF family phenazine biosynthesis isomerase -
  JNUCC22_RS04235 (JNUCC22_04235) - 841476..842060 (+) 585 WP_007408549.1 nitroreductase -
  JNUCC22_RS04240 (JNUCC22_04240) - 842101..842292 (-) 192 WP_003155508.1 YfhD family protein -
  JNUCC22_RS04245 (JNUCC22_04245) - 842363..842473 (-) 111 WP_003155504.1 YfhE family protein -
  JNUCC22_RS04250 (JNUCC22_04250) - 842531..843430 (-) 900 WP_216062153.1 TIGR01777 family oxidoreductase -
  JNUCC22_RS04255 (JNUCC22_04255) recX 843522..844313 (+) 792 WP_029325989.1 recombination regulator RecX Regulator
  JNUCC22_RS04260 (JNUCC22_04260) - 844320..844634 (+) 315 WP_007408553.1 YfhH family protein -
  JNUCC22_RS04265 (JNUCC22_04265) - 844779..845972 (+) 1194 WP_025284446.1 MFS transporter -
  JNUCC22_RS04270 (JNUCC22_04270) - 846012..846401 (-) 390 WP_007610158.1 DUF2606 family protein -
  JNUCC22_RS04275 (JNUCC22_04275) - 846364..847275 (-) 912 WP_216062154.1 serine protease -
  JNUCC22_RS04280 (JNUCC22_04280) - 847421..847573 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  JNUCC22_RS04285 (JNUCC22_04285) - 847697..847966 (+) 270 WP_003155492.1 YfhJ family protein -
  JNUCC22_RS04290 (JNUCC22_04290) - 848094..848621 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  JNUCC22_RS04295 (JNUCC22_04295) - 848707..849042 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31020.21 Da        Isoelectric Point: 6.0921

>NTDB_id=575031 JNUCC22_RS04255 WP_029325989.1 843522..844313(+) (recX) [Bacillus sp. JNUCC-22]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRYDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=575031 JNUCC22_RS04255 WP_029325989.1 843522..844313(+) (recX) [Bacillus sp. JNUCC-22]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTATGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGTTCTGAAAAAGAAGTC
CGGGACCACCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAAACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAGATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCCCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791