Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I653_RS04395 Genome accession   NC_020832
Coordinates   889871..890662 (+) Length   263 a.a.
NCBI ID   WP_015383146.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 884871..895662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS04370 (I653_04240) sxzA 885710..886741 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  I653_RS04375 (I653_04245) yfhB 886856..887737 (+) 882 WP_015383143.1 PhzF family phenazine biosynthesis isomerase -
  I653_RS04380 (I653_04250) yfhC 887825..888409 (+) 585 WP_015482973.1 nitroreductase -
  I653_RS04385 (I653_04255) yfhD 888448..888639 (-) 192 WP_003233561.1 YfhD family protein -
  I653_RS20205 (I653_04260) yfhE 888706..888816 (-) 111 WP_003223230.1 YfhE family protein -
  I653_RS04390 (I653_04265) yfhF 888871..889782 (-) 912 WP_015482974.1 TIGR01777 family oxidoreductase -
  I653_RS04395 (I653_04270) recX 889871..890662 (+) 792 WP_015383146.1 recombination regulator RecX Regulator
  I653_RS04400 (I653_04275) yfhH 890671..890985 (+) 315 WP_015383147.1 YfhH family protein -
  I653_RS04405 (I653_04280) yfhI 891128..892321 (+) 1194 WP_015482975.1 MFS transporter -
  I653_RS04410 (I653_04285) sspK 892353..892505 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  I653_RS04415 (I653_04290) yfhJ 892630..892899 (+) 270 WP_003243789.1 YfhJ family protein -
  I653_RS04420 (I653_04295) yfhK 893044..893562 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  I653_RS04425 (I653_04300) spdL 893647..893979 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  I653_RS04430 (I653_04305) ephM 893966..894826 (+) 861 WP_015383151.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30898.10 Da        Isoelectric Point: 6.6690

>NTDB_id=57494 I653_RS04395 WP_015383146.1 889871..890662(+) (recX) [Bacillus subtilis subsp. subtilis str. BAB-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EEHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=57494 I653_RS04395 WP_015383146.1 889871..890662(+) (recX) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGAGCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

100

0.992

Multiple sequence alignment