Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   I653_RS01880 Genome accession   NC_020832
Coordinates   362815..363213 (-) Length   132 a.a.
NCBI ID   WP_015482779.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 357815..368213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS01855 (I653_01675) yckA 358385..359065 (-) 681 WP_015382730.1 amino acid ABC transporter permease -
  I653_RS01860 (I653_01680) yckB 359075..359938 (-) 864 WP_015482776.1 transporter substrate-binding domain-containing protein -
  I653_RS20895 - 360100..360297 (+) 198 WP_144052033.1 hypothetical protein -
  I653_RS01865 (I653_01695) yckC 360347..360778 (+) 432 WP_046340202.1 RDD family protein -
  I653_RS01870 (I653_01700) yckD 360860..361192 (+) 333 WP_015252849.1 YckD family protein -
  I653_RS01875 (I653_01705) bglC 361345..362778 (+) 1434 WP_015382735.1 6-phospho-beta-glucosidase -
  I653_RS01880 (I653_01710) nin/comJ 362815..363213 (-) 399 WP_015482779.1 DNA-entry nuclease inhibitor Regulator
  I653_RS01885 (I653_01715) nucA/comI 363240..363689 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  I653_RS01890 (I653_01720) tlpC 363855..365576 (-) 1722 WP_041517645.1 methyl-accepting chemotaxis protein TlpC -
  I653_RS01895 (I653_01725) hxlB 365687..366244 (-) 558 WP_015482781.1 6-phospho-3-hexuloisomerase -
  I653_RS01900 (I653_01730) hxlA 366250..366882 (-) 633 WP_015482782.1 3-hexulose-6-phosphate synthase -
  I653_RS01905 (I653_01735) hxlR 367114..367476 (+) 363 WP_015482783.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14907.94 Da        Isoelectric Point: 5.5671

>NTDB_id=57488 I653_RS01880 WP_015482779.1 362815..363213(-) (nin/comJ) [Bacillus subtilis subsp. subtilis str. BAB-1]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDVTIKKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=57488 I653_RS01880 WP_015482779.1 362815..363213(-) (nin/comJ) [Bacillus subtilis subsp. subtilis str. BAB-1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGTAACGATTAAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

95.455

100

0.955

Multiple sequence alignment