Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CTB89_RS03820 Genome accession   NZ_AP017891
Coordinates   782885..783559 (+) Length   224 a.a.
NCBI ID   WP_020977053.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GN3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 777885..788559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS03790 - 778102..779169 (+) 1068 WP_020977051.1 hypothetical protein -
  CTB89_RS03795 - 779320..780363 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  CTB89_RS03805 - 780692..781120 (+) 429 WP_000198505.1 hypothetical protein -
  CTB89_RS03810 - 781327..781833 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CTB89_RS03815 graX 781946..782869 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  CTB89_RS03820 braR 782885..783559 (+) 675 WP_020977053.1 response regulator transcription factor GraR/ApsR Regulator
  CTB89_RS03825 graS 783552..784592 (+) 1041 WP_020977054.1 histidine kinase GraS/ApsS -
  CTB89_RS03830 vraF 784736..785497 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CTB89_RS03835 vraG 785487..787376 (+) 1890 WP_000143631.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26121.00 Da        Isoelectric Point: 4.4019

>NTDB_id=57475 CTB89_RS03820 WP_020977053.1 782885..783559(+) (braR) [Staphylococcus aureus strain GN3]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTITWQDAIIDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=57475 CTB89_RS03820 WP_020977053.1 782885..783559(+) (braR) [Staphylococcus aureus strain GN3]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGATAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTCCTGTCTAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

42.534

98.661

0.42

Multiple sequence alignment