Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   KM388_RS06080 Genome accession   NZ_CP076216
Coordinates   1161920..1162603 (+) Length   227 a.a.
NCBI ID   WP_000350709.1    Uniprot ID   -
Organism   Bacillus anthracis strain SA020     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1156920..1167603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KM388_RS06060 (KM388_06060) - 1158068..1159672 (+) 1605 WP_011178668.1 peptide ABC transporter substrate-binding protein -
  KM388_RS06065 (KM388_06065) - 1159699..1159902 (-) 204 WP_000559980.1 hypothetical protein -
  KM388_RS06070 (KM388_06070) spx 1160474..1160869 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  KM388_RS06075 (KM388_06075) - 1160919..1161593 (-) 675 WP_000362608.1 TerC family protein -
  KM388_RS06080 (KM388_06080) mecA 1161920..1162603 (+) 684 WP_000350709.1 adaptor protein MecA Regulator
  KM388_RS06085 (KM388_06085) - 1162676..1164220 (+) 1545 WP_000799204.1 cardiolipin synthase -
  KM388_RS06090 (KM388_06090) - 1164302..1165546 (+) 1245 WP_000612267.1 competence protein CoiA family protein -
  KM388_RS06095 (KM388_06095) pepF 1165597..1167423 (+) 1827 WP_000003398.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26937.95 Da        Isoelectric Point: 3.9822

>NTDB_id=573656 KM388_RS06080 WP_000350709.1 1161920..1162603(+) (mecA) [Bacillus anthracis strain SA020]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDAISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=573656 KM388_RS06080 WP_000350709.1 1161920..1162603(+) (mecA) [Bacillus anthracis strain SA020]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGCCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559