Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   KM399_RS20170 Genome accession   NZ_CP076192
Coordinates   3863090..3863524 (-) Length   144 a.a.
NCBI ID   WP_000811492.1    Uniprot ID   A0A0G8EA73
Organism   Bacillus anthracis strain UR-1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3858090..3868524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KM399_RS20155 (KM399_20145) - 3859165..3859722 (+) 558 WP_000062079.1 PadR family transcriptional regulator -
  KM399_RS20160 (KM399_20150) metE 3860339..3862627 (+) 2289 WP_001007635.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  KM399_RS20165 (KM399_20155) comJ 3862664..3863053 (-) 390 WP_000424033.1 competence protein ComJ -
  KM399_RS20170 (KM399_20160) nucA/comI 3863090..3863524 (-) 435 WP_000811492.1 DNA-entry nuclease Machinery gene
  KM399_RS20175 (KM399_20165) - 3863761..3864510 (+) 750 WP_000388464.1 DUF3967 domain-containing protein -
  KM399_RS20180 (KM399_20170) kinB 3864564..3865838 (-) 1275 WP_000420390.1 sporulation sensor histidine kinase KinB -
  KM399_RS20185 (KM399_20175) - 3866149..3866349 (+) 201 WP_000929284.1 hypothetical protein -
  KM399_RS20190 (KM399_20180) - 3866472..3867635 (+) 1164 WP_000434598.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16012.35 Da        Isoelectric Point: 8.4331

>NTDB_id=573294 KM399_RS20170 WP_000811492.1 3863090..3863524(-) (nucA/comI) [Bacillus anthracis strain UR-1]
MKQLKGIIISIIAILSILVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=573294 KM399_RS20170 WP_000811492.1 3863090..3863524(-) (nucA/comI) [Bacillus anthracis strain UR-1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTTTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGCGCTGCGGATAGAAGAAAG
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0G8EA73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556