Detailed information NTG0572600

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: MQG44_RS03315
• Genome accession: NZ_CP093912
• Coordinates: 711500..712924 (+)
• Length: 474 a.a.
• NCBI ID: WP_014702199.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 14R
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 706500..717924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MQG44_RS03310	-	710613..711485 (+)	873	WP_005538868.1	DMT family transporter	-
MQG44_RS03315	sbcB	711500..712924 (+)	1425	WP_014702199.1	exodeoxyribonuclease I	Machinery gene
MQG44_RS03320	ftnA	713825..714310 (+)	486	WP_005538870.1	non-heme ferritin	-
MQG44_RS03325	ftnA	714326..714823 (+)	498	WP_005538871.1	non-heme ferritin	-
MQG44_RS03330	-	714885..715055 (-)	171	WP_005538872.1	hypothetical protein	-
MQG44_RS03335	-	715164..715937 (+)	774	WP_005538873.1	FNR family transcription factor	-
MQG44_RS03340	uspE	716055..716987 (+)	933	WP_005538874.1	universal stress protein UspE	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 54830.36 Da
• Isoelectric Point: 5.4219

>NTDB_id=572600 MQG44_RS03315 WP_014702199.1 711500..712924(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain 14R]
MAKNDFSFFIYDYESFGVNPAKDRPAQFGGIRTDADFNIIGEPIVLYCKQTNDYLPAPEAVLVTGITPQECNEKGLSEPE
FAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPS
FRLEKLTEANGIAHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGMLGNYRGNT
TLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGALPVPLKLIHINKCPIVAPAKTLLPQNAE
RLGIDQELCAKNRQRLQEARDIRQKVMDIFHQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDP
RIPELLFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGAQIIG

Nucleotide

• Length: 1425 bp

>NTDB_id=572600 MQG44_RS03315 WP_014702199.1 711500..712924(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain 14R]
ATGGCAAAAAACGACTTTAGTTTTTTTATTTATGATTACGAAAGCTTTGGGGTTAATCCCGCAAAGGATCGCCCGGCACA
ATTCGGTGGCATTCGTACCGACGCAGATTTTAATATTATCGGTGAGCCGATTGTCCTTTATTGCAAGCAAACTAACGATT
ATTTGCCGGCACCGGAAGCGGTTTTAGTCACCGGAATTACACCACAGGAATGCAACGAAAAAGGGCTGTCGGAACCCGAA
TTTGCCGCCAAAATTTTACAGGAATTCAGCCGTCCGAATACTTGCGTGATGGGCTTTAATAACATTCGTTATGACGATGA
AATGACCCGTTATACGTTTTACCGTAATTTTATCGATCCTTATGAATACAGCTGGAAAAACGGCAATTCCCGTTGGGATT
TGCTGGATTTGGTGCGTGCTTGCTATGCGTTGCGTCCGGACGGTATTGAATGGCCTTTAGATGATGAAGGTATGCCGAGT
TTCCGCCTGGAAAAACTGACAGAGGCCAATGGAATAGCGCACGATAATGCGCATGATGCCATGTCAGATGTGTATGCCAC
TATTGAAATGGCAAAGCTCATCAAGCAGAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGGGGTAAAAAAGAGG
TTGAAAAGCTCATCGATACTGCAGAAATGACACCATTGGTACATGTATCGGGAATGTTGGGGAATTATCGCGGAAATACC
ACGTTAATTGCATCTTTAGCCTGGCATCCGACGAATAAAAATGCCGTTATTGTGTGTGATTTAACTGCTAATATTGATGA
TTTATTAACAAAATCGGTAGAGGAGTTGCGTGAAAATCTTTACACCAAAAAAGAGACCTTATTGGCTGCCGGTGCATTGC
CAGTGCCATTGAAGCTCATTCATATCAATAAATGTCCGATTGTTGCGCCGGCTAAAACTTTATTGCCGCAAAACGCCGAA
CGTCTAGGCATTGATCAGGAATTATGCGCAAAAAATCGACAACGTTTGCAGGAAGCAAGAGATATTCGCCAAAAAGTAAT
GGATATTTTTCATCAGGAACGTGAATTTGACGCTTCCGATAATGTTGAAACCAAACTGTATAACGGCTTTTTTAGTGACG
CCGATAAAAACAATATGGCGATTTTACGCAGTTTGGAACCCGAAAAATTGGCTAAACATAATCTTAGTTTTCAAGATCCA
CGAATTCCTGAATTACTGTTCCATTATCGTGCCAGACATTTCTATCGTACATTGAACCGTGCGGAACAAATTAAATGGCA
AAAATACTGCCGTAAAAAATTAGATGCCGAGGCTTTGCAATTTGAACAACGTCTTCAAGAATTAGCCGAACAATATTCCA
ACAATGAAGAAAATCTTATGTTATTGCAAAAGGTCTATGAATATGGAGCCCAAATAATCGGTTAA

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (10-189)

• Exonuclease C-terminal (ExoI_SH3) (209-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.545	97.468	0.532