Detailed information NTG0572567

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: MQG37_RS06040
• Genome accession: NZ_CP093911
• Coordinates: 1173424..1174851 (-)
• Length: 475 a.a.
• NCBI ID: WP_012821000.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 16R
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1168424..1179851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MQG37_RS06005	-	1168822..1168992 (+)	171	WP_005544707.1	hypothetical protein	-
MQG37_RS06010	ftnA	1169054..1169551 (-)	498	WP_005544705.1	non-heme ferritin	-
MQG37_RS06015	ftnA	1169567..1170052 (-)	486	WP_005544704.1	non-heme ferritin	-
MQG37_RS06020	-	1170873..1171322 (-)	450	Protein_1157	type II secretion system protein GspD	-
MQG37_RS06025	-	1171291..1171902 (-)	612	WP_005544699.1	hypothetical protein	-
MQG37_RS06030	-	1172200..1173006 (-)	807	WP_162199730.1	IS3 family transposase	-
MQG37_RS06035	-	1173003..1173342 (-)	340	Protein_1160	transposase	-
MQG37_RS06040	sbcB	1173424..1174851 (-)	1428	WP_012821000.1	exodeoxyribonuclease I	Machinery gene
MQG37_RS06045	-	1174863..1175735 (-)	873	WP_258286234.1	DMT family transporter	-

Sequence

Protein

• Length: 475 a.a.
• Molecular weight: 55094.72 Da
• Isoelectric Point: 5.1197

>NTDB_id=572567 MQG37_RS06040 WP_012821000.1 1173424..1174851(-) (sbcB) [Aggregatibacter actinomycetemcomitans strain 16R]
MMAKNDFSFFIYDYESFGVNPATDRPAQFGGIRTDEDFNIIGEPIVLYCKQTNDYLPAPEAVLVTGITPQECNEKGLWEP
EFAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMP
SFRLEKLTEANGIAHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGMLGNYRGN
TTLIAPLTWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGALPVPLKLIHINKCPIVAPAKTLLPQNA
ERLGIDQELCAQNRQRLQEAKDIRQKVMDIFHQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQD
PRIPELLFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGTKIIG

Nucleotide

• Length: 1428 bp

>NTDB_id=572567 MQG37_RS06040 WP_012821000.1 1173424..1174851(-) (sbcB) [Aggregatibacter actinomycetemcomitans strain 16R]
ATGATGGCAAAAAACGACTTTAGTTTTTTTATTTATGATTATGAAAGTTTTGGGGTCAATCCCGCAACGGATCGCCCGGC
ACAATTCGGTGGCATTCGCACTGACGAGGATTTTAATATTATCGGTGAGCCGATTGTTCTTTATTGCAAGCAAACTAACG
ATTATTTGCCTGCACCAGAAGCGGTTTTAGTCACCGGAATTACACCACAGGAATGCAACGAAAAAGGGCTGTGGGAACCC
GAATTTGCCGCCAAAATTTTACAGGAATTCAGCCGTCCGAATACTTGCGTGATGGGCTTTAATAACATTCGTTATGACGA
TGAAATGACCCGTTATACGTTTTACCGTAATTTTATCGATCCTTATGAATACAGCTGGAAAAACGGCAATTCCCGTTGGG
ATTTACTGGATTTGGTGCGTGCTTGCTATGCGTTGCGCCCGGACGGTATTGAATGGCCTTTAGATGATGAAGGTATGCCG
AGTTTCCGCCTGGAAAAACTGACAGAGGCCAATGGAATAGCGCACGATAGTGCGCATGATGCCATGTCAGATGTGTATGC
CACTATTGAAATGGCAAAGCTCATCAAGCGGAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGGGGTAAAAAGG
AGGTTGAAAAGCTCATCGATACCGCAGAAATGATGCCATTGGTACATGTGTCGGGAATGTTGGGGAATTATCGCGGAAAT
ACCACGTTAATTGCACCTTTAACCTGGCATCCGACGAATAAAAATGCCGTTATTGTCTGTGATTTAACTGCCGATATTGA
TGATTTATTAACAAAATCGGTAGGGGAGTTGCGTGAAAATCTTTACACCAAAAAAGAGACCTTATTGGCTGCCGGTGCAT
TGCCTGTGCCATTGAAACTCATTCATATCAATAAATGTCCGATTGTTGCGCCGGCTAAAACTTTGTTGCCACAAAACGCC
GAACGTTTAGGTATTGATCAGGAGTTATGTGCGCAAAACCGACAACGTTTGCAGGAAGCAAAAGATATTCGCCAAAAAGT
AATGGATATTTTTCATCAGGAACGTGAATTTGACGCTTCCGATAATGTTGAAACCGAACTGTATAACGGCTTTTTTAGTG
ACGCCGATAAAAACAATATGGCGATTTTACGCAGTTTGGAACCCGAAAAATTGGCTAAACATAATCTTAGTTTTCAAGAT
CCACGAATTCCTGAATTGCTGTTCCATTATCGTGCCAGACATTTCTATCGTACATTGAACCGTGCGGAACAAATTAAATG
GCAAAAATACTGCCGTAAAAAATTAGATGCCGAGGCTTTGCAATTTGAACAACGTCTTCAAGAATTAGCCGAACAATATT
CCAACAATGAAGAAAATCTTATGTTATTGCAAAAGGTCTATGAATATGGAACGAAAATAATCGGTTAA

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (210-471)

• Exonuclease (RNase_T) (11-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	53.066	99.579	0.528