Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MQG37_RS01855 Genome accession   NZ_CP093911
Coordinates   368246..368881 (-) Length   211 a.a.
NCBI ID   WP_005548057.1    Uniprot ID   -
Organism   Aggregatibacter actinomycetemcomitans strain 16R     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 363246..373881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQG37_RS01830 - 363512..363796 (-) 285 WP_005548070.1 chaperone NapD -
  MQG37_RS01835 narQ 364073..365776 (+) 1704 WP_005548066.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
  MQG37_RS01840 murB 365791..366816 (+) 1026 WP_005566996.1 UDP-N-acetylmuramate dehydrogenase -
  MQG37_RS01845 - 366832..367146 (+) 315 WP_005548062.1 DUF2322 family protein -
  MQG37_RS01850 rpoH 367331..368179 (+) 849 WP_005548059.1 RNA polymerase sigma factor RpoH -
  MQG37_RS01855 sxy/tfoX 368246..368881 (-) 636 WP_005548057.1 TfoX/Sxy family DNA transformation protein Regulator
  MQG37_RS01860 tuf 370168..371352 (-) 1185 WP_014167500.1 elongation factor Tu -
  MQG37_RS01865 fusA 371416..373518 (-) 2103 WP_005548681.1 elongation factor G -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23952.09 Da        Isoelectric Point: 10.4976

>NTDB_id=572546 MQG37_RS01855 WP_005548057.1 368246..368881(-) (sxy/tfoX) [Aggregatibacter actinomycetemcomitans strain 16R]
MTTVSQRLKNEFKQLVDGEISIKNLFTGHGIFHSGIMFALHQNDSIFLRAEDELVPYLESLGAVAYSIDPNNTNKLALHR
YYQLPHSIRKNKPLFEKTVKLSIQQAKFKKVAEDLTKKERIKELANFSIKHERLLAKINIYTVSEFQKIGAIHSYVRLKK
LGVSANVELLWTLCAALKNKHASLLTEKEKSAILTKLNVLLAANGLRKVKA

Nucleotide


Download         Length: 636 bp        

>NTDB_id=572546 MQG37_RS01855 WP_005548057.1 368246..368881(-) (sxy/tfoX) [Aggregatibacter actinomycetemcomitans strain 16R]
ATGACAACGGTATCTCAAAGACTCAAGAACGAATTCAAACAACTAGTAGATGGTGAAATCAGTATTAAAAATTTATTCAC
CGGACATGGTATATTTCATTCAGGAATAATGTTTGCACTTCATCAAAACGATAGCATTTTCTTGCGGGCTGAAGATGAGT
TAGTCCCTTACTTAGAGAGTTTAGGTGCTGTAGCTTATTCAATTGATCCCAATAATACGAATAAACTGGCACTCCACCGT
TACTATCAACTTCCTCATTCTATTCGTAAAAATAAGCCGTTATTTGAAAAAACCGTTAAATTGTCTATTCAACAGGCAAA
ATTTAAGAAAGTCGCTGAAGATTTGACAAAAAAAGAGCGAATTAAAGAATTGGCTAATTTTTCCATTAAGCATGAAAGAT
TGCTGGCTAAAATTAATATTTATACGGTAAGTGAATTTCAGAAGATCGGCGCAATTCACAGCTATGTTAGGTTAAAGAAA
CTGGGTGTTTCTGCCAACGTAGAATTGTTATGGACTTTATGCGCCGCATTAAAAAATAAGCATGCTTCGTTGCTTACGGA
AAAGGAAAAATCGGCAATTTTGACTAAATTAAATGTTTTACTTGCAGCAAATGGTTTGCGGAAAGTAAAGGCCTAA

Domains

Predicted by InterProScan.

TfoX N-terminal domain (TfoX_N)

(15-106)

TfoX C-terminal domain (TfoX_C)

(118-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

40.513

92.417

0.374