Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MNY32_RS14035 Genome accession   NZ_CP093535
Coordinates   3020925..3021368 (-) Length   147 a.a.
NCBI ID   WP_071615340.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain SL1931     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3015925..3026368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY32_RS14020 (MNY32_14020) - 3017444..3019675 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  MNY32_RS14025 (MNY32_14025) - 3019921..3020466 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  MNY32_RS14030 (MNY32_14030) pilH 3020525..3020893 (-) 369 WP_003269243.1 response regulator Machinery gene
  MNY32_RS14035 (MNY32_14035) pilG 3020925..3021368 (-) 444 WP_071615340.1 response regulator Regulator
  MNY32_RS14040 (MNY32_14040) - 3021683..3021865 (-) 183 WP_003261842.1 rubredoxin -
  MNY32_RS14045 (MNY32_14045) hemL 3022077..3023378 (+) 1302 WP_020831381.1 glutamate-1-semialdehyde 2,1-aminomutase -
  MNY32_RS14050 (MNY32_14050) dapA 3023481..3024395 (-) 915 WP_020831380.1 4-hydroxy-tetrahydrodipicolinate synthase -
  MNY32_RS14055 (MNY32_14055) - 3024776..3025402 (+) 627 WP_016723449.1 LemA family protein -
  MNY32_RS14060 (MNY32_14060) - 3025415..3026263 (+) 849 WP_058908261.1 TPM domain-containing protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 15807.37 Da        Isoelectric Point: 8.2887

>NTDB_id=572379 MNY32_RS14035 WP_071615340.1 3020925..3021368(-) (pilG) [Ralstonia pseudosolanacearum strain SL1931]
MQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDG
YLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 444 bp        

>NTDB_id=572379 MNY32_RS14035 WP_071615340.1 3020925..3021368(-) (pilG) [Ralstonia pseudosolanacearum strain SL1931]
ATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCTTGCCGGCCGTAAAGTGCTGGTGAT
CGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATTGCCAGGTCGTGCTGGCCGAAGACG
GGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGACATCCTGATGCCCAAGCTGGACGGT
TACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGTCATGCTGTCGTCGCGCGACGGGGT
GTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTTTCTCGCGGGAAGCGCTGCTGGAGG
CGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(24-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

80.952

0.442