Detailed information NTG0572046

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L0Q35_RS21420
• Genome accession: NZ_CP093369
• Coordinates: 4448220..4449245 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EV36 mutant 5a
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4443220..4454245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0Q35_RS21400 (L0Q35_21400)	metJ	4444405..4444722 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
L0Q35_RS21405 (L0Q35_21405)	yiiX	4444782..4445390 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
L0Q35_RS21410 (L0Q35_21410)	rpmE	4445451..4445663 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
L0Q35_RS21415 (L0Q35_21415)	priA	4445866..4448064 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
L0Q35_RS21420 (L0Q35_21420)	cytR	4448220..4449245 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L0Q35_RS21425 (L0Q35_21425)	ftsN	4449337..4450296 (+)	960	WP_000068834.1	cell division protein FtsN	-
L0Q35_RS21430 (L0Q35_21430)	hslV	4450389..4450919 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
L0Q35_RS21435 (L0Q35_21435)	hslU	4450929..4452260 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
L0Q35_RS21440 (L0Q35_21440)	menA	4452327..4453253 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L0Q35_RS21445 (L0Q35_21445)	rraA	4453346..4453831 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L0Q35_RS21450 (L0Q35_21450)	zapB	4453916..4454161 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=572046 L0Q35_RS21420 WP_000644904.1 4448220..4449245(+) (cytR) [Escherichia coli strain EV36 mutant 5a]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=572046 L0Q35_RS21420 WP_000644904.1 4448220..4449245(+) (cytR) [Escherichia coli strain EV36 mutant 5a]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628