Detailed information NTG0572005

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KMZ31_RS02045
• Genome accession: NZ_CP076117
• Coordinates: 396841..397989 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain CQN-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391841..402989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ31_RS02025 (KMZ31_01975)	-	392244..392927 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
KMZ31_RS02030 (KMZ31_01980)	-	392942..394372 (-)	1431	WP_032872876.1	ABC transporter permease	-
KMZ31_RS02035 (KMZ31_01985)	-	394585..395268 (+)	684	WP_032872879.1	response regulator transcription factor	-
KMZ31_RS02040 (KMZ31_01990)	-	395255..396688 (+)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
KMZ31_RS02045 (KMZ31_01995)	rapC	396841..397989 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
KMZ31_RS02050 (KMZ31_02000)	phrC	397973..398092 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KMZ31_RS02055 (KMZ31_02005)	-	398243..398338 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
KMZ31_RS02060 (KMZ31_02010)	-	398433..399797 (-)	1365	WP_007609394.1	aspartate kinase	-
KMZ31_RS02065 (KMZ31_02015)	ceuB	400211..401164 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
KMZ31_RS02070 (KMZ31_02020)	-	401154..402101 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
KMZ31_RS02075 (KMZ31_02025)	-	402095..402853 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=572005 KMZ31_RS02045 WP_007410270.1 396841..397989(+) (rapC) [Bacillus amyloliquefaciens strain CQN-2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=572005 KMZ31_RS02045 WP_007410270.1 396841..397989(+) (rapC) [Bacillus amyloliquefaciens strain CQN-2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568