Detailed information NTG0057197

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CPZ03_RS22785
• Genome accession: NZ_AP017617
• Coordinates: 4516833..4517858 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MRY15-117
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4511833..4522858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPZ03_RS22760 (MRY15117_c41610)	rraA	4512247..4512732 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CPZ03_RS22765 (MRY15117_c41620)	menA	4512825..4513751 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CPZ03_RS22770 (MRY15117_c41630)	hslU	4513818..4515149 (-)	1332	WP_001293340.1	HslU--HslV peptidase ATPase subunit	-
CPZ03_RS22775 (MRY15117_c41640)	hslV	4515159..4515689 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
CPZ03_RS22780 (MRY15117_c41650)	ftsN	4515782..4516741 (-)	960	WP_000068841.1	cell division protein FtsN	-
CPZ03_RS22785 (MRY15117_c41660)	cytR	4516833..4517858 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CPZ03_RS22790 (MRY15117_c41670)	priA	4518014..4520212 (-)	2199	WP_001361702.1	primosomal protein N'	Machinery gene
CPZ03_RS22795 (MRY15117_c41680)	rpmE	4520415..4520627 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
CPZ03_RS22800 (MRY15117_c41690)	yiiX	4520688..4521296 (-)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
CPZ03_RS22805 (MRY15117_c41700)	metJ	4521356..4521673 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=57197 CPZ03_RS22785 WP_000644904.1 4516833..4517858(-) (cytR) [Escherichia coli strain MRY15-117]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=57197 CPZ03_RS22785 WP_000644904.1 4516833..4517858(-) (cytR) [Escherichia coli strain MRY15-117]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGATTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628