Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KM293_RS22220 Genome accession   NZ_CP076106
Coordinates   4637345..4637941 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KpIM03_1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4632345..4642941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KM293_RS22195 (KM293_22160) - 4632537..4634294 (-) 1758 WP_004147851.1 Lon protease family protein -
  KM293_RS22200 (KM293_22165) matP 4634480..4634932 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KM293_RS22205 (KM293_22170) ompA 4635064..4636134 (-) 1071 WP_002898408.1 porin OmpA -
  KM293_RS22210 (KM293_22175) sulA 4636487..4636996 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KM293_RS22215 (KM293_22180) - 4637039..4637254 (-) 216 WP_009485781.1 hypothetical protein -
  KM293_RS22220 (KM293_22185) sxy/tfoX 4637345..4637941 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  KM293_RS22225 (KM293_22190) yccS 4637955..4640090 (-) 2136 WP_004213263.1 YccS family putative transporter -
  KM293_RS22230 (KM293_22195) - 4640108..4640554 (-) 447 WP_002898425.1 YccF domain-containing protein -
  KM293_RS22235 (KM293_22200) helD 4640679..4642733 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=571918 KM293_RS22220 WP_004150836.1 4637345..4637941(+) (sxy/tfoX) [Klebsiella pneumoniae strain KpIM03_1]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=571918 KM293_RS22220 WP_004150836.1 4637345..4637941(+) (sxy/tfoX) [Klebsiella pneumoniae strain KpIM03_1]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51