Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KME82_RS19560 Genome accession   NZ_CP076103
Coordinates   4689099..4689497 (-) Length   132 a.a.
NCBI ID   WP_036112825.1    Uniprot ID   A0A108UDA6
Organism   Lysobacter capsici strain NF87_2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4684099..4694497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KME82_RS19545 (KME82_19545) - 4686080..4688098 (-) 2019 WP_215495488.1 methyl-accepting chemotaxis protein -
  KME82_RS19550 (KME82_19550) - 4688154..4688705 (-) 552 WP_036112830.1 chemotaxis protein CheW -
  KME82_RS19555 (KME82_19555) - 4688714..4689079 (-) 366 WP_036112827.1 response regulator -
  KME82_RS19560 (KME82_19560) pilG 4689099..4689497 (-) 399 WP_036112825.1 twitching motility response regulator PilG Regulator
  KME82_RS19565 (KME82_19565) gshB 4689829..4690791 (+) 963 WP_215495489.1 glutathione synthase -
  KME82_RS19570 (KME82_19570) - 4690788..4691669 (+) 882 WP_215495490.1 energy transducer TonB -
  KME82_RS19575 (KME82_19575) - 4691770..4692594 (-) 825 WP_215495491.1 hypothetical protein -
  KME82_RS19580 (KME82_19580) tsaB 4692597..4693325 (-) 729 WP_215495492.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  KME82_RS19585 (KME82_19585) - 4693697..4694134 (-) 438 WP_215495493.1 VOC family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14824.25 Da        Isoelectric Point: 7.1362

>NTDB_id=571839 KME82_RS19560 WP_036112825.1 4689099..4689497(-) (pilG) [Lysobacter capsici strain NF87_2]
MLDEVRSGSLDGLKVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=571839 KME82_RS19560 WP_036112825.1 4689099..4689497(-) (pilG) [Lysobacter capsici strain NF87_2]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTGAAGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAGCGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAGGCGTTGGCGAAGATCGCCG
ATCAGCAGCCACAGATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGTGCGCTCATCAAGAAC
AATCAACTGTTCAAGAGCACGCCGGTCATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCATCGT
CGGATCGGAGCAGTACCTGACCAAGCCATTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTTCACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A108UDA6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.939

0.705