Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KME73_RS05710 Genome accession   NZ_CP076099
Coordinates   1124271..1124942 (-) Length   223 a.a.
NCBI ID   WP_004270751.1    Uniprot ID   A0A1B2A7J9
Organism   Latilactobacillus curvatus strain SPC-SNU 70-3     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1119271..1129942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KME73_RS05685 (KME73_05685) rpsO 1119585..1119854 (-) 270 WP_004271112.1 30S ribosomal protein S15 -
  KME73_RS05690 (KME73_05690) rpsT 1120131..1120385 (+) 255 WP_004271117.1 30S ribosomal protein S20 -
  KME73_RS05695 (KME73_05695) holA 1120440..1121468 (-) 1029 WP_004270758.1 DNA polymerase III subunit delta -
  KME73_RS05700 (KME73_05700) comEC 1121469..1123583 (-) 2115 WP_235805391.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KME73_RS05705 (KME73_05705) - 1123724..1124212 (-) 489 WP_111447701.1 ComE operon protein 2 -
  KME73_RS05710 (KME73_05710) comEA 1124271..1124942 (-) 672 WP_004270751.1 helix-hairpin-helix domain-containing protein Machinery gene
  KME73_RS05715 (KME73_05715) - 1125019..1126065 (-) 1047 WP_215499265.1 SepM family pheromone-processing serine protease -
  KME73_RS05720 (KME73_05720) coaD 1126067..1126561 (-) 495 WP_004270756.1 pantetheine-phosphate adenylyltransferase -
  KME73_RS05725 (KME73_05725) rsmD 1126573..1127127 (-) 555 WP_004270750.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KME73_RS05730 (KME73_05730) - 1127133..1127423 (-) 291 WP_004270748.1 YlbG family protein -
  KME73_RS05735 (KME73_05735) - 1127443..1128531 (-) 1089 WP_215499266.1 CAP-associated domain-containing protein -
  KME73_RS05740 (KME73_05740) - 1128544..1129731 (-) 1188 WP_004270744.1 FtsW/RodA/SpoVE family cell cycle protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 24849.51 Da        Isoelectric Point: 9.9048

>NTDB_id=571814 KME73_RS05710 WP_004270751.1 1124271..1124942(-) (comEA) [Latilactobacillus curvatus strain SPC-SNU 70-3]
MWRDYWQRYRRFWWVPCLVIILLGGGVFWQHSRQQRFLSTNQQLMAQSTKRKVKAKPVKQKKSVSKGGFVDIKGAVAHPG
IYPICVAKTRLFEVLKQAGDVTEAADTSQLNLAQTLSDQLIIYVPTKGEAVQAEELVKAADEPQAATDNQAGASPISTDA
KINLNQADATQLQTLNGIGPKKAEQIIAYRDEQGQFKQIEDLQKVGGIGPKTFEQLRPQICVN

Nucleotide


Download         Length: 672 bp        

>NTDB_id=571814 KME73_RS05710 WP_004270751.1 1124271..1124942(-) (comEA) [Latilactobacillus curvatus strain SPC-SNU 70-3]
ATGTGGCGCGACTATTGGCAACGGTATCGTCGATTCTGGTGGGTACCTTGTTTGGTGATAATTTTACTTGGTGGTGGTGT
GTTTTGGCAGCATAGTCGGCAACAACGTTTTCTATCAACCAATCAACAATTGATGGCGCAATCAACTAAGCGAAAAGTGA
AGGCAAAACCCGTCAAACAGAAGAAAAGCGTCTCAAAAGGTGGGTTTGTCGATATCAAAGGCGCTGTGGCACATCCAGGG
ATTTATCCGATTTGTGTTGCAAAGACGCGTTTATTTGAGGTGCTGAAACAAGCGGGGGATGTGACCGAAGCAGCGGATAC
GAGTCAGTTGAACTTAGCGCAAACATTGAGTGACCAACTTATTATCTATGTGCCAACTAAGGGAGAAGCGGTGCAAGCCG
AAGAATTAGTGAAAGCGGCAGACGAGCCACAGGCTGCGACTGACAATCAAGCGGGAGCCAGTCCGATATCAACTGATGCT
AAAATCAACCTAAACCAAGCGGATGCGACACAATTGCAAACGCTAAATGGCATCGGTCCTAAAAAAGCTGAACAAATAAT
TGCATATCGGGATGAGCAAGGGCAGTTTAAACAAATCGAAGATCTTCAAAAAGTTGGGGGAATTGGGCCGAAAACGTTTG
AACAATTACGGCCACAAATTTGTGTTAATTAG

Domains

Predicted by InterproScan.

SLBB domain (SLBB)

(70-115)

Helix-hairpin-helix motif (HHH_3)

(160-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B2A7J9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Latilactobacillus sakei subsp. sakei 23K

64.53

100

0.677
  comEA Lactococcus lactis subsp. cremoris KW2

36.283

100

0.368