Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | KB891_RS01540 | Genome accession | NZ_CP076049 |
| Coordinates | 327099..328361 (-) | Length | 420 a.a. |
| NCBI ID | WP_024569515.1 | Uniprot ID | A0A132HGL0 |
| Organism | Cupriavidus metallidurans strain YL2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 322099..333361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KB891_RS01515 (KB891_01515) | ntrB | 322202..323071 (-) | 870 | WP_051385285.1 | nitrate ABC transporter permease | - |
| KB891_RS01520 (KB891_01520) | - | 323182..324486 (-) | 1305 | WP_017514458.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| KB891_RS01525 (KB891_01525) | - | 324864..325499 (-) | 636 | WP_024569516.1 | ANTAR domain-containing response regulator | - |
| KB891_RS01530 (KB891_01530) | - | 325674..326375 (+) | 702 | WP_017514460.1 | fumarylacetoacetate hydrolase family protein | - |
| KB891_RS01535 (KB891_01535) | maiA | 326380..327027 (+) | 648 | WP_011515169.1 | maleylacetoacetate isomerase | - |
| KB891_RS01540 (KB891_01540) | pilA | 327099..328361 (-) | 1263 | WP_024569515.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| KB891_RS01545 (KB891_01545) | - | 328422..329936 (+) | 1515 | WP_024569514.1 | M16 family metallopeptidase | - |
| KB891_RS01550 (KB891_01550) | - | 329945..331309 (+) | 1365 | WP_024569513.1 | M16 family metallopeptidase | - |
| KB891_RS01555 (KB891_01555) | rsmD | 331418..332050 (+) | 633 | WP_024569512.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| KB891_RS01560 (KB891_01560) | coaD | 332262..332747 (+) | 486 | WP_011515175.1 | pantetheine-phosphate adenylyltransferase | - |
| KB891_RS01565 (KB891_01565) | - | 332814..333074 (+) | 261 | WP_017511014.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 420 a.a. Molecular weight: 44141.24 Da Isoelectric Point: 6.9898
>NTDB_id=571662 KB891_RS01540 WP_024569515.1 327099..328361(-) (pilA) [Cupriavidus metallidurans strain YL2]
MFSFWKKRKAEPAPESVEPPAAAPTPAPAPAPAPLPAPTPAAAPAVTPVAPPVAVPVATPVSTPASTPAPAPTPAPAPVH
VAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG
MFSFWKKRKAEPAPESVEPPAAAPTPAPAPAPAPLPAPTPAAAPAVTPVAPPVAVPVATPVSTPASTPAPAPTPAPAPVH
VAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG
Nucleotide
Download Length: 1263 bp
>NTDB_id=571662 KB891_RS01540 WP_024569515.1 327099..328361(-) (pilA) [Cupriavidus metallidurans strain YL2]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCCGAATCGGTCGAGCCGCCCGCGGCCGCCCCCACACCGGC
GCCTGCTCCTGCGCCGGCCCCGCTTCCCGCCCCCACCCCGGCTGCGGCACCTGCGGTAACCCCTGTCGCCCCCCCTGTAG
CGGTACCCGTTGCAACCCCGGTTTCGACCCCGGCTTCAACACCTGCGCCAGCTCCAACGCCCGCCCCGGCGCCCGTCCAT
GTGGCGCCACCCGTGGCGCCACCGGTCGTGCCGCCCGTGGCGTCGGCTCCGCCTCCGGCCAGCTACACGCCGCCGGTCAT
CGAGGAACTGGAGCTGACCCCGCCGCCCGCGCAAACCGCCGAAGCCAAGCGCGGCTGGATGTCGCGACTGCGTGCCGGCC
TGTCGAAGACCAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAACTGGAAACG
GCGCTGCTGATGGCCGATGCCGGCGTGGAGGCCACCGAGTACCTGCTGGGCGAACTGCGCCGCCGCATCAAGAATGATCG
TATCGAAACGGCCGAAGGCGTGAAGGCCGCGCTCAAGGATCTGCTGACGCAACTGCTCAAGCCGCTCGAGAAGACGATGG
AACTGGGCCGCGAGCAGCCGCTGGTGATGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGTAAGCTT
TGCAAGCATTTCCAGTCCTATCACCAGTCCGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCCGCCGCGCGCGAACAACT
CACGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCCCAGGAAAGCGGCGACCCAGCCGCCGTGATCTTCGATGCCG
TCAACGCGGCGCGCGCGCGCAAGATCGACATCGTGATGGCAGATACCGCTGGCCGCCTGCCCACGCAGCTTCACCTGATG
GAGGAACTCAAGAAGGTCAAGCGCGTGATCGGCAAGTCGATGCCGACCGCACCGCATGAAGTGCTGCTCGTGATCGACGC
CAATACCGGTCAGAACGCACTGGCCCAGACGCGCGCGTTCGATGACGCGCTCGGCCTGACCGGCCTGATCGTGACCAAGC
TCGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGTCCGGTACCGGTGTACTTTATCGGCGTGGGC
GAGAAGGTCGAGGACCTGCAGCCGTTCAAGGCGGACGAGTTCGCCGAGGCGCTGCTGGGCTGA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCCGAATCGGTCGAGCCGCCCGCGGCCGCCCCCACACCGGC
GCCTGCTCCTGCGCCGGCCCCGCTTCCCGCCCCCACCCCGGCTGCGGCACCTGCGGTAACCCCTGTCGCCCCCCCTGTAG
CGGTACCCGTTGCAACCCCGGTTTCGACCCCGGCTTCAACACCTGCGCCAGCTCCAACGCCCGCCCCGGCGCCCGTCCAT
GTGGCGCCACCCGTGGCGCCACCGGTCGTGCCGCCCGTGGCGTCGGCTCCGCCTCCGGCCAGCTACACGCCGCCGGTCAT
CGAGGAACTGGAGCTGACCCCGCCGCCCGCGCAAACCGCCGAAGCCAAGCGCGGCTGGATGTCGCGACTGCGTGCCGGCC
TGTCGAAGACCAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAACTGGAAACG
GCGCTGCTGATGGCCGATGCCGGCGTGGAGGCCACCGAGTACCTGCTGGGCGAACTGCGCCGCCGCATCAAGAATGATCG
TATCGAAACGGCCGAAGGCGTGAAGGCCGCGCTCAAGGATCTGCTGACGCAACTGCTCAAGCCGCTCGAGAAGACGATGG
AACTGGGCCGCGAGCAGCCGCTGGTGATGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGTAAGCTT
TGCAAGCATTTCCAGTCCTATCACCAGTCCGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCCGCCGCGCGCGAACAACT
CACGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCCCAGGAAAGCGGCGACCCAGCCGCCGTGATCTTCGATGCCG
TCAACGCGGCGCGCGCGCGCAAGATCGACATCGTGATGGCAGATACCGCTGGCCGCCTGCCCACGCAGCTTCACCTGATG
GAGGAACTCAAGAAGGTCAAGCGCGTGATCGGCAAGTCGATGCCGACCGCACCGCATGAAGTGCTGCTCGTGATCGACGC
CAATACCGGTCAGAACGCACTGGCCCAGACGCGCGCGTTCGATGACGCGCTCGGCCTGACCGGCCTGATCGTGACCAAGC
TCGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGTCCGGTACCGGTGTACTTTATCGGCGTGGGC
GAGAAGGTCGAGGACCTGCAGCCGTTCAAGGCGGACGAGTTCGCCGAGGCGCTGCTGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
49.533 |
100 |
0.505 |