Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KH238_RS19495 Genome accession   NZ_CP076045
Coordinates   32339..32503 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain VCN56     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 27339..37503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KH238_RS19490 srfAB 29284..32274 (+) 2991 Protein_17 surfactin non-ribosomal peptide synthetase SrfAB -
  KH238_RS19495 comS 32339..32503 (+) 165 WP_269195014.1 competence protein ComS Regulator
  KH238_RS19500 - 32449..33279 (+) 831 Protein_19 condensation domain-containing protein -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=571653 KH238_RS19495 WP_269195014.1 32339..32503(+) (comS) [Bacillus velezensis strain VCN56]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=571653 KH238_RS19495 WP_269195014.1 32339..32503(+) (comS) [Bacillus velezensis strain VCN56]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5