Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   KI244_RS10835 Genome accession   NZ_CP076029
Coordinates   2160408..2161295 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus sp. MZ9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2155408..2166295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI244_RS10805 (KI244_10805) - 2155426..2155518 (+) 93 WP_010956583.1 hypothetical protein -
  KI244_RS10810 (KI244_10810) - 2155626..2156123 (-) 498 WP_001065268.1 glutathione peroxidase -
  KI244_RS10815 (KI244_10815) - 2156133..2156393 (-) 261 WP_001791974.1 hypothetical protein -
  KI244_RS10820 (KI244_10820) - 2156775..2156888 (-) 114 WP_072384844.1 hypothetical protein -
  KI244_RS10825 (KI244_10825) - 2157547..2159547 (-) 2001 WP_045178208.1 ABC transporter permease -
  KI244_RS10830 (KI244_10830) - 2159544..2160299 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  KI244_RS10835 (KI244_10835) braS 2160408..2161295 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  KI244_RS10840 (KI244_10840) braR 2161306..2161971 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  KI244_RS10845 (KI244_10845) - 2161997..2162197 (-) 201 WP_000604727.1 hypothetical protein -
  KI244_RS10850 (KI244_10850) - 2162395..2163819 (+) 1425 WP_000953748.1 alkaline phosphatase -
  KI244_RS14175 - 2163879..2163980 (-) 102 WP_000731976.1 SE2200 family small protein -
  KI244_RS10860 (KI244_10860) - 2164102..2164557 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  KI244_RS10865 (KI244_10865) - 2164802..2165563 (-) 762 WP_214958283.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=571563 KI244_RS10835 WP_000143426.1 2160408..2161295(-) (braS) [Staphylococcus sp. MZ9]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=571563 KI244_RS10835 WP_000143426.1 2160408..2161295(-) (braS) [Staphylococcus sp. MZ9]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997