Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ABD1_RS01310 | Genome accession | NC_020547 |
| Coordinates | 285430..285756 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii D1279779 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 280430..290756
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABD1_RS01285 (ABD1_02450) | hemC | 281047..281964 (+) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
| ABD1_RS01290 (ABD1_02460) | - | 281969..282736 (+) | 768 | WP_000897409.1 | uroporphyrinogen-III synthase | - |
| ABD1_RS01295 (ABD1_02470) | - | 282745..283584 (+) | 840 | WP_001230197.1 | hypothetical protein | - |
| ABD1_RS01300 (ABD1_02480) | - | 283594..284787 (+) | 1194 | WP_000681780.1 | membrane protein | - |
| ABD1_RS01305 (ABD1_02490) | - | 284795..285235 (+) | 441 | WP_000661569.1 | acyl-CoA thioesterase | - |
| ABD1_RS01310 (ABD1_02500) | hns | 285430..285756 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ABD1_RS01315 (ABD1_02510) | gspN | 286088..286831 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ABD1_RS01320 (ABD1_02520) | - | 286831..287667 (+) | 837 | WP_000870026.1 | type II secretion system protein N | - |
| ABD1_RS01325 (ABD1_02530) | gspD | 287709..289985 (+) | 2277 | WP_001196428.1 | type II secretion system secretin GspD | - |
| ABD1_RS01330 (ABD1_02540) | - | 290026..290655 (+) | 630 | WP_000219968.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=57154 ABD1_RS01310 WP_000801427.1 285430..285756(+) (hns) [Acinetobacter baumannii D1279779]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=57154 ABD1_RS01310 WP_000801427.1 285430..285756(+) (hns) [Acinetobacter baumannii D1279779]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |