Detailed information NTG0571019

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MN092_RS07490
• Genome accession: NZ_CP093290
• Coordinates: 1485656..1486774 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain DSM 13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1480656..1491774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MN092_RS07465 (MN092_07465)	-	1480856..1482361 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
MN092_RS07470 (MN092_07470)	-	1482443..1483654 (-)	1212	WP_003180218.1	cation:proton antiporter	-
MN092_RS07475 (MN092_07475)	-	1483661..1484158 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
MN092_RS07480 (MN092_07480)	-	1484223..1484552 (-)	330	WP_016886161.1	hypothetical protein	-
MN092_RS07485 (MN092_07485)	-	1484753..1485529 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
MN092_RS07490 (MN092_07490)	rapC	1485656..1486774 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
MN092_RS07495 (MN092_07495)	-	1486764..1486901 (+)	138	WP_016886158.1	hypothetical protein	-
MN092_RS07500 (MN092_07500)	-	1486906..1487184 (+)	279	WP_003180226.1	hypothetical protein	-
MN092_RS07505 (MN092_07505)	-	1487259..1487444 (-)	186	WP_003180228.1	YhzD family protein	-
MN092_RS07510 (MN092_07510)	-	1487562..1488458 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
MN092_RS07515 (MN092_07515)	-	1488451..1489719 (+)	1269	WP_003180232.1	ABC transporter permease	-
MN092_RS07520 (MN092_07520)	-	1489839..1491065 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=571019 MN092_RS07490 WP_009328956.1 1485656..1486774(+) (rapC) [Bacillus licheniformis strain DSM 13]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=571019 MN092_RS07490 WP_009328956.1 1485656..1486774(+) (rapC) [Bacillus licheniformis strain DSM 13]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374