Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   MNG38_RS21290 Genome accession   NZ_CP093289
Coordinates   4096446..4097240 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain H2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4091446..4102240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS21265 (MNG38_21265) - 4092559..4093242 (-) 684 WP_048654834.1 response regulator transcription factor -
  MNG38_RS21270 (MNG38_21270) - 4093454..4094353 (+) 900 WP_029726116.1 PepSY domain-containing protein -
  MNG38_RS21275 (MNG38_21275) - 4094514..4095014 (+) 501 WP_029726115.1 PepSY domain-containing protein -
  MNG38_RS21280 (MNG38_21280) - 4095011..4095141 (-) 131 Protein_4149 hypothetical protein -
  MNG38_RS21285 (MNG38_21285) htrA 4095162..4096364 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  MNG38_RS21290 (MNG38_21290) vicX 4096446..4097240 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  MNG38_RS21295 (MNG38_21295) walI 4097262..4098104 (-) 843 WP_029726114.1 WalRK two-component regulatory system regulator WalI -
  MNG38_RS21300 (MNG38_21300) walH 4098091..4099458 (-) 1368 WP_061891275.1 WalRK two-component regulatory system regulator WalH -
  MNG38_RS21305 (MNG38_21305) walK 4099448..4101283 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  MNG38_RS21310 (MNG38_21310) walR 4101291..4101998 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=570982 MNG38_RS21290 WP_003226939.1 4096446..4097240(-) (vicX) [Bacillus subtilis strain H2]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=570982 MNG38_RS21290 WP_003226939.1 4096446..4097240(-) (vicX) [Bacillus subtilis strain H2]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53