Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   MNG38_RS09925 Genome accession   NZ_CP093289
Coordinates   1946029..1948032 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1941029..1953032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS09885 (MNG38_09885) pghL 1941393..1942151 (+) 759 WP_015252005.1 gamma-polyglutamate hydrolase PghL -
  MNG38_RS09890 (MNG38_09890) - 1942178..1942627 (-) 450 WP_044052523.1 YndM family protein -
  MNG38_RS09895 (MNG38_09895) fosM 1942838..1943257 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  MNG38_RS09900 (MNG38_09900) - 1943181..1943520 (+) 340 Protein_1899 hypothetical protein -
  MNG38_RS09905 (MNG38_09905) dinR/lexA 1943807..1944424 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  MNG38_RS09910 (MNG38_09910) yneA 1944574..1944891 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  MNG38_RS09915 (MNG38_09915) dinL 1944910..1945563 (+) 654 WP_048654895.1 recombinase family protein -
  MNG38_RS09920 (MNG38_09920) ynzC 1945627..1945860 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  MNG38_RS09925 (MNG38_09925) recP/tkt 1946029..1948032 (+) 2004 WP_014476936.1 transketolase Machinery gene
  MNG38_RS09930 (MNG38_09930) sirA 1948185..1948631 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  MNG38_RS09935 (MNG38_09935) yneF 1948717..1948935 (+) 219 WP_003221221.1 YneF family protein -
  MNG38_RS09940 (MNG38_09940) ynzD 1949009..1949182 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  MNG38_RS09945 (MNG38_09945) ccdA 1949402..1950109 (+) 708 WP_015252000.1 cytochrome c-type biogenesis protein CcdA -
  MNG38_RS09950 (MNG38_09950) yneI 1950198..1950560 (+) 363 WP_003245707.1 response regulator -
  MNG38_RS09955 (MNG38_09955) yneJ 1950639..1951130 (+) 492 WP_010886519.1 CcdC family protein -
  MNG38_RS09960 (MNG38_09960) yneK 1951161..1951589 (-) 429 WP_015251998.1 DynA interaction protein YneK -
  MNG38_RS09965 (MNG38_09965) cotM 1951824..1952216 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  MNG38_RS09970 (MNG38_09970) sspP 1952297..1952443 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  MNG38_RS09975 (MNG38_09975) sspO 1952475..1952621 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=570914 MNG38_RS09925 WP_014476936.1 1946029..1948032(+) (recP/tkt) [Bacillus subtilis strain H2]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=570914 MNG38_RS09925 WP_014476936.1 1946029..1948032(+) (recP/tkt) [Bacillus subtilis strain H2]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGA
TCCGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACAGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562