Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   MNG38_RS07050 Genome accession   NZ_CP093289
Coordinates   1340428..1341564 (+) Length   378 a.a.
NCBI ID   WP_015252291.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335428..1346564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS07030 (MNG38_07030) uxaA 1335878..1337371 (+) 1494 WP_015252294.1 UxaA family hydrolase -
  MNG38_RS07035 (MNG38_07035) yjnA 1337410..1338174 (-) 765 WP_003245643.1 sulfite exporter TauE/SafE family protein -
  MNG38_RS07040 (MNG38_07040) bstD 1338399..1338863 (-) 465 WP_015715724.1 DinB family protein -
  MNG38_RS07045 (MNG38_07045) yjoB 1339012..1340283 (+) 1272 WP_015252292.1 ATPase YjoB -
  MNG38_RS07050 (MNG38_07050) rapC 1340428..1341564 (+) 1137 WP_015252291.1 response regulator aspartate phosphatase RapA Regulator
  MNG38_RS07055 (MNG38_07055) phrA 1341554..1341688 (+) 135 WP_003245487.1 phosphatase RapA inhibitor PhrA -
  MNG38_RS07060 (MNG38_07060) yjpA 1341719..1341976 (-) 258 WP_003232731.1 YciI family protein -
  MNG38_RS07065 (MNG38_07065) xlyB 1342097..1343050 (+) 954 WP_015252290.1 N-acetylmuramoyl-L-alanine amidase -
  MNG38_RS07070 (MNG38_07070) yjqA 1343090..1343467 (-) 378 WP_014479546.1 PH domain-containing protein -
  MNG38_RS07075 (MNG38_07075) pghB 1343573..1344175 (+) 603 WP_003244789.1 poly-gamma-glutamate hydrolase family protein -
  MNG38_RS07080 (MNG38_07080) xpdC 1344252..1345088 (+) 837 WP_003245071.1 manganese catalase family protein -
  MNG38_RS07085 (MNG38_07085) xkdA 1345132..1345728 (-) 597 WP_015252288.1 ImmA/IrrE family metallo-endopeptidase -
  MNG38_RS07090 (MNG38_07090) xre 1345891..1346232 (-) 342 WP_003232719.1 HTH-type transcriptional regulator Xre -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 45046.23 Da        Isoelectric Point: 4.7218

>NTDB_id=570889 MNG38_RS07050 WP_015252291.1 1340428..1341564(+) (rapC) [Bacillus subtilis strain H2]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=570889 MNG38_RS07050 WP_015252291.1 1340428..1341564(+) (rapC) [Bacillus subtilis strain H2]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCACCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTGTTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAACTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCAGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCTTGATCAGTTCTGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(6-67)

Tetratricopeptide repeat (TPR_12)

(221-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

44.947

99.471

0.447
  rapF Bacillus subtilis subsp. subtilis str. 168

41.689

100

0.418